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Aliases for LOC400499 Gene
Aliases for LOC400499 Gene
External Ids for LOC400499 Gene
Previous GeneCards Identifiers for LOC400499 Gene
- GC16M011502
- GC16M011397
- GC16M011490
- GC16M011453
- GC16M011360
- GC16M011362
Summaries for LOC400499 Gene
GeneCards Summary for LOC400499 Gene
LOC400499 (Putative Uncharacterized Protein LOC400499) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include lipid transporter activity.
Additional gene information for LOC400499 Gene
- Entrez Gene(400499)
- Ensembl(ENSG00000188897)
- UniProtKB(M0QZD8)
- UniProtKB(M0R2I5)
- UniProtKB(M0R2X1)
- UniProtKB(M0R1J3)
- Open Targets Platform(ENSG00000188897)
- Search for LOC400499 at DataMed
- Search for LOC400499 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC400499 Gene
Genomics for LOC400499 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC400499 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC400499 on the GeneHancer Hub at the UCSC Golden Path
- Top Transcription factor binding sites by QIAGEN in the LOC400499 gene promoter:
-
- AML1a
- GR
- GR-alpha
- GR-beta
- HSF2
- p53
- Pax-5
- Pax-6
- Sox9
- SRY
Genomic Locations for LOC400499 Gene
Genomic Locations for LOC400499 Gene
- chr16:11,359,845-11,527,247
- (GRCh38/hg38)
- Size:
- 167,403 bases
- Orientation:
- Minus strand
- chr16:11,453,702-11,617,444
- (GRCh37/hg19)
- Size:
- 163,743 bases
- Orientation:
- Minus strand
Genomic View for LOC400499 Gene
Genes around LOC400499 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 16p13.13 by Entrez Gene
- 16p13.13 by Ensembl
LOC400499 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC400499 Gene
Proteins for LOC400499 Gene
-
Protein details for LOC400499 Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- M0QZD8-M0QZD8_HUMAN
- Recommended name:
- Uncharacterized protein
- Protein Accession:
- M0QZD8
Protein attributes for LOC400499 Gene
- Size:
- 3266 amino acids
- Molecular mass:
- 357809 Da
- Quaternary structure:
- No Data Available
-
Protein details for LOC400499 Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- M0R2I5-M0R2I5_HUMAN
- Recommended name:
- Uncharacterized protein
- Protein Accession:
- M0R2I5
Protein attributes for LOC400499 Gene
- Size:
- 46 amino acids
- Molecular mass:
- 4948 Da
- Quaternary structure:
- No Data Available
-
Protein details for LOC400499 Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- M0R2X1-M0R2X1_HUMAN
- Recommended name:
- VWFD domain-containing protein
- Protein Accession:
- M0R2X1
Protein attributes for LOC400499 Gene
- Size:
- 455 amino acids
- Molecular mass:
- 49139 Da
- Quaternary structure:
- No Data Available
-
Protein details for LOC400499 Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- M0R1J3-M0R1J3_HUMAN
- Recommended name:
- Uncharacterized protein
- Protein Accession:
- M0R1J3
Protein attributes for LOC400499 Gene
- Size:
- 79 amino acids
- Molecular mass:
- 9097 Da
- Quaternary structure:
- No Data Available
Protein Expression for LOC400499 Gene
Post-translational modifications for LOC400499 Gene
No Post-translational modifications
Other Protein References for LOC400499 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
-
- XP_016879418.1
- XP_016879419.1
- XP_016879420.1
- XP_016879421.1
- XP_016879422.1
- XP_016879423.1
- XP_016879424.1
- XP_016879425.1
- XP_016879426.1
- XP_016879427.1
- XP_016879428.1
- XP_016879429.1
- XP_016879430.1
- XP_016879431.1
- XP_016879432.1
- XP_016879433.1
- XP_016879434.1
- XP_016879435.1
- XP_016879436.1
- XP_016879437.1
- XP_016879438.1
- NP_001357633.1
Antibody Products
- Novus Biologicals Antibodies for LOC400499
- Invitrogen Antibodies for LOC400499 (AFLGC-LOC400499)
- antibodies-online: Show 22 available Vitellogenin Antibodies ranked by validation data
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC400499
- Origene Custom Protein Services for LOC400499
- Novus Biologicals proteins for LOC400499
No data available for DME Specific Peptides for LOC400499 Gene
Domains & Families for LOC400499 Gene
Gene Families for LOC400499 Gene
- Human Protein Atlas (HPA):
-
- Predicted intracellular proteins
Protein Domains for LOC400499 Gene
No data available for Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC400499 Gene
Function for LOC400499 Gene
Phenotypes From GWAS Catalog for LOC400499 Gene
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0005319 | lipid transporter activity | IBA | -- |
Phenotypes for LOC400499 Gene
- GenomeRNAi human phenotypes for LOC400499:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
-
OriGene CRISPR knockouts for LOC400499
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC400499
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LOC400499
- Browse OriGene Inhibitory RNA Products For LOC400499
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC400499
Clone Products
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC400499
No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC400499 Gene
Localization for LOC400499 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC400499 Gene
Pathways & Interactions for LOC400499 Gene
Interacting Proteins for LOC400499 Gene
GPS-Prot Interaction Network for LOC400499
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006869 | lipid transport | IEA | -- |
| GO:0032355 | response to estradiol | IBA | -- |
| GO:0071391 | cellular response to estrogen stimulus | IBA | -- |
No data available for Pathways by source and SIGNOR curated interactions for LOC400499 Gene
Transcripts for LOC400499 Gene
mRNA/cDNA for LOC400499 Gene
- 1 REFSEQ mRNAs :
- 1 NCBI additional mRNA sequence :
- 8 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000595168 550 nts (view in UCSC)
- ENST00000595170 3552 nts (view in UCSC)
- ENST00000596416 518 nts (view in UCSC)
- ENST00000598234 10590 nts (view in UCSC)
- ENST00000599216 2085 nts (view in UCSC)
CRISPR Products
-
OriGene CRISPR knockouts for LOC400499
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC400499
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LOC400499
- Browse OriGene Inhibitory RNA Products For LOC400499
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC400499
Clone Products
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC400499
Relevant External Links for LOC400499 Gene
- GeneLoc Exon Structure for
- LOC400499
Expression for LOC400499 Gene
This gene is overexpressed in Breast (67.4).
- Elite partner
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC400499
SOURCE GeneReport for Unigene cluster for LOC400499 Gene:
Hs.459937Primer Products
-
OriGene qPCR primer pairs for LOC400499
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC400499 Gene
Orthologs for LOC400499 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| Chimpanzee (Pan troglodytes) |
Mammalia | LOC738641 30 |
|
||
| -- 31 |
|
OneToOne | |||
| Cow (Bos Taurus) |
Mammalia | LOC616782 30 |
|
||
| -- 31 |
|
OneToOne | |||
| Dog (Canis familiaris) |
Mammalia | LOC102153019 30 |
|
||
| -- 31 |
|
OneToOne | |||
| Platypus (Ornithorhynchus anatinus) |
Mammalia | -- 31 |
|
OneToOne | |
| Oppossum (Monodelphis domestica) |
Mammalia | -- 31 |
|
OneToOne | |
| Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | LOC100496911 30 |
|
||
| Zebrafish (Danio rerio) |
Actinopterygii | si:dkeyp-106c3.1 31 |
|
OneToOne | |
| LOC101882735 30 |
|
- Species where no ortholog for LOC400499 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Eremothecium gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- Alpha proteobacteria (Wolbachia pipientis)
- Amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- Baker's yeast (Saccharomyces cerevisiae)
- Barley (Hordeum vulgare)
- Beta proteobacteria (Neisseria meningitidis)
- Bread mold (Neurospora crassa)
- Chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- Common water flea (Daphnia pulex)
- Corn (Zea mays)
- E. coli (Escherichia coli)
- Filamentous fungi (Aspergillus nidulans)
- Firmicute Bacteria (Streptococcus pneumoniae)
- Fission Yeast (Schizosaccharomyces pombe)
- Fruit Fly (Drosophila melanogaster)
- Green Algae (Chlamydomonas reinhardtii)
- Honey Bee (Apis mellifera)
- K. Lactis Yeast (Kluyveromyces lactis)
- Lizard (Anolis carolinensis)
- Loblloly Pine (Pinus taeda)
- Malaria Parasite (Plasmodium falciparum)
- Medicago Trunc (Medicago Truncatula)
- Moss (Physcomitrella patens)
- Mouse (Mus musculus)
- Orangutan (Pongo pygmaeus)
- Pig (Sus scrofa)
- Rainbow Trout (Oncorhynchus mykiss)
- Rat (Rattus norvegicus)
- Rice (Oryza sativa)
- Rice Blast Fungus (Magnaporthe grisea)
- Schistosome Parasite (Schistosoma mansoni)
- Sea Anemone (Nematostella vectensis)
- Sea Vase (Ciona intestinalis)
- Sea Squirt (Ciona savignyi)
- Sea Urchin (Strongylocentrotus purpuratus)
- Sorghum (Sorghum bicolor)
- Soybean (Glycine max)
- Stem Rust Fungus (Puccinia graminis)
- Sugarcane (Saccharum officinarum)
- Thale Cress (Arabidopsis thaliana)
- Tomato (Lycopersicon esculentum)
- Toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- Wheat (Triticum aestivum)
- Worm (Caenorhabditis elegans)
Paralogs for LOC400499 Gene
No data available for Paralogs for LOC400499 Gene
Variants for LOC400499 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC400499 Gene
Disorders for LOC400499 Gene
Additional Disease Information for LOC400499
- Genetic Association Database
- (GAD)
- Open Targets Platform
No disorders were found for LOC400499 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC400499 Gene
Publications for LOC400499 Gene
- A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome. (PMID: 28065597) Yao Z … Stagljar I (Molecular cell 2017) 3
- The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J … Pennacchio LA (Nature 2004) 13
No data available for Mastermind for LOC400499 Gene
Products for LOC400499 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC400499
- Origene Custom Protein Services for LOC400499
- Origene shrna and RNAi products in human, mouse, rat for LOC400499
- Browse OriGene Inhibitory RNA Products For LOC400499
- OriGene qPCR primer pairs for LOC400499
- OriGene CRISPR knockouts for LOC400499
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC400499
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals Antibodies for LOC400499
- Novus Biologicals proteins for LOC400499
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Invitrogen Antibodies for LOC400499 (AFLGC-LOC400499)
- VectorBuilder Custom and pre-made DNA vectors for LOC400499 (ie. gene expression, shRNA knockdown, CRISPR)
- VectorBuilder Viral vectors for LOC400499 (ie. lentivirus, AAV, adenovirus)
- VectorBuilder CRISPR vectors for LOC400499 (ie. knockout, knockin, CRISPRa, CRISPRi)
- VectorBuilder Virus packaging for LOC400499 CRISPR vectors (ie. lentivirus, AAV, adenovirus)
- VectorBuilder Stable cell line generation for LOC400499
- antibodies-online: Show 22 available Vitellogenin Antibodies ranked by validation data
- antibodies-online: Search results for available Vitellogenin related products ranked by validation data
- antibodies-online: Search results for available Vitellogenin related products ranked by validation data
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC400499
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC400499
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC400499
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC400499
Sources for LOC400499 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB