Aliases for LOC400499 Gene
Aliases for LOC400499 Gene
External Ids for LOC400499 Gene
Previous GeneCards Identifiers for LOC400499 Gene
- GC16M011502
- GC16M011397
- GC16M011490
- GC16M011453
Summaries for LOC400499 Gene
GeneCards Summary for LOC400499 Gene
LOC400499 (Putative Uncharacterized Protein LOC400499) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include lipid transporter activity.
Additional gene information for LOC400499 Gene
- Entrez Gene(400499)
- Ensembl(ENSG00000188897)
- UniProtKB(M0QZD8)
- UniProtKB(M0R2X1)
- UniProtKB(M0R1J3)
- UniProtKB(M0R2I5)
- Search for LOC400499 at DataMed
- Search for LOC400499 at HumanCyc
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC400499 Gene
Genomics for LOC400499 Gene
GeneHancer (GH) Regulatory Elements for LOC400499 Gene
Promoters and enhancers for LOC400499 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC400499 on UCSC Golden Path with GeneCards custom track
- Top Transcription factor binding sites by QIAGEN in the LOC400499 gene promoter:
-
- AML1a
- GR
- GR-alpha
- GR-beta
- HSF2
- p53
- Pax-5
- Pax-6
- Sox9
- SRY
Genomic Locations for LOC400499 Gene
Genomic Locations for LOC400499 Gene
- chr16:11,359,845-11,527,245
- (GRCh38/hg38)
- Size:
- 167,401 bases
- Orientation:
- Minus strand
- chr16:11,453,702-11,617,444
- (GRCh37/hg19)
- Size:
- 163,743 bases
- Orientation:
- Minus strand
Genomic View for LOC400499 Gene
Genes around LOC400499 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 16p13.13 by Entrez Gene
- 16p13.13 by Ensembl
LOC400499 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC400499 Gene
Proteins for LOC400499 Gene
-
Protein details for LOC400499 Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- M0R1J3-M0R1J3_HUMAN
- Recommended name:
- Uncharacterized protein
- Protein Accession:
- M0R1J3
Protein attributes for LOC400499 Gene
- Size:
- 79 amino acids
- Molecular mass:
- 9097 Da
- Quaternary structure:
- No Data Available
-
Protein details for LOC400499 Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- M0QZD8-M0QZD8_HUMAN
- Recommended name:
- Uncharacterized protein
- Protein Accession:
- M0QZD8
Protein attributes for LOC400499 Gene
- Size:
- 3266 amino acids
- Molecular mass:
- 357809 Da
- Quaternary structure:
- No Data Available
-
Protein details for LOC400499 Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- M0R2I5-M0R2I5_HUMAN
- Recommended name:
- Uncharacterized protein
- Protein Accession:
- M0R2I5
Protein attributes for LOC400499 Gene
- Size:
- 46 amino acids
- Molecular mass:
- 4948 Da
- Quaternary structure:
- No Data Available
-
Protein details for LOC400499 Gene (UniProtKB/TrEMBL)
- Protein Symbol:
- M0R2X1-M0R2X1_HUMAN
- Recommended name:
- VWFD domain-containing protein
- Protein Accession:
- M0R2X1
Protein attributes for LOC400499 Gene
- Size:
- 455 amino acids
- Molecular mass:
- 49139 Da
- Quaternary structure:
- No Data Available
Protein Expression for LOC400499 Gene
Post-translational modifications for LOC400499 Gene
No Post-translational modifications
Other Protein References for LOC400499 Gene
- ENSEMBL proteins:
- REFSEQ proteins:
-
- XP_016879436.1
- XP_016879426.1
- XP_016879429.1
- XP_016879419.1
- XP_016879431.1
- XP_016879421.1
- XP_016879434.1
- XP_016879424.1
- XP_016879437.1
- XP_016879427.1
- NP_001357633.1
- XP_016879432.1
- XP_016879422.1
- XP_016879435.1
- XP_016879425.1
- XP_016879438.1
- XP_016879428.1
- XP_016879418.1
- XP_016879430.1
- XP_016879420.1
- XP_016879433.1
- XP_016879423.1
Antibody Products
- Atlas Antibodies Anti-CTD-3088G3.8 Antibody
- Novus Biologicals Antibodies for LOC400499
- Invitrogen Antibodies for LOC400499 (AFLGC-LOC400499)
- antibodies-online: Show 22 available Vitellogenin Antibodies ranked by validation data
Protein Products
- Atlas Antibodies PrEST Antigen CTD-3088G3.8
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC400499
- Origene Custom Protein Services for LOC400499
- Novus Biologicals proteins for LOC400499
No data available for DME Specific Peptides for LOC400499 Gene
Domains & Families for LOC400499 Gene
Protein Domains for LOC400499 Gene
No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC400499 Gene
Function for LOC400499 Gene
Phenotypes From GWAS Catalog for LOC400499 Gene
Phenotypes for LOC400499 Gene
- GenomeRNAi human phenotypes for LOC400499:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LOC400499
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC400499
- genomics-online: gRNA clones - Search for available Vitellogenin gRNA products
- Overview of 4 available Vitellogenin gene related products
-
Recommended
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LOC400499
- Browse OriGene Inhibitory RNA Products For LOC400499
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC400499
- genomics-online: shRNA clones - Search for available Vitellogenin shRNA products
- Overview of 4 available Vitellogenin gene related products
-
Recommended
Clone Products
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC400499
- genomics-online: cdna clones - Search for available Vitellogenin CDNA products
- Overview of 4 available Vitellogenin gene related products
-
Recommended
- orf clones - Search for available Vitellogenin ORF products
- Overview of 4 available Vitellogenin gene related products
-
Recommended
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC400499 Gene
Localization for LOC400499 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC400499 Gene
Pathways & Interactions for LOC400499 Gene
Interacting Proteins for LOC400499 Gene
GPS-Prot Interaction Network for LOC400499
| GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|---|---|---|
| GO:0006869 | lipid transport | IEA | -- |
| GO:0032355 | response to estradiol | IBA | -- |
| GO:0071391 | cellular response to estrogen stimulus | IBA | -- |
No data available for Pathways by source and SIGNOR curated interactions for LOC400499 Gene
Drugs & Compounds for LOC400499 Gene
No Compound Related Data Available
Drug Products
- Atlas Antibodies PrEST Antigen CTD-3088G3.8
Transcripts for LOC400499 Gene
mRNA/cDNA for LOC400499 Gene
- (1) REFSEQ mRNAs :
- (1) Additional mRNA sequences :
- (5) Selected AceView cDNA sequences:
- (8) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000595168 550 bps (ENST00000595168.1)
- ENST00000599216 2085 bps (ENST00000599216.5)
- ENST00000598234 10590 bps (ENST00000598234.6)
- ENST00000600548 456 bps (ENST00000600548.1)
- ENST00000612858 1046 bps (ENST00000612858.1)
CRISPR Products
- Browse CRISPR knockouts for LOC400499
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC400499
- genomics-online: gRNA clones - Search for available Vitellogenin gRNA products
- Overview of 4 available Vitellogenin gene related products
-
Recommended
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LOC400499
- Browse OriGene Inhibitory RNA Products For LOC400499
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC400499
- genomics-online: shRNA clones - Search for available Vitellogenin shRNA products
- Overview of 4 available Vitellogenin gene related products
-
Recommended
Clone Products
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC400499
- genomics-online: cdna clones - Search for available Vitellogenin CDNA products
- Overview of 4 available Vitellogenin gene related products
-
Recommended
- orf clones - Search for available Vitellogenin ORF products
- Overview of 4 available Vitellogenin gene related products
-
Recommended
Relevant External Links for LOC400499 Gene
- GeneLoc Exon Structure for
- LOC400499
Expression for LOC400499 Gene
This gene is overexpressed in Breast (67.4).
- Elite partner
SOURCE GeneReport for Unigene cluster for LOC400499 Gene:
Hs.459937Primer Products
-
OriGene qPCR primer pairs for LOC400499
- genomics-online: primer clones - Search for available Vitellogenin Primer products
- Overview of 4 available Vitellogenin gene related products
-
Recommended
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC400499 Gene
Orthologs for LOC400499 Gene
This gene was present in the common ancestor of chordates.
| Organism | Taxonomy | Gene | Similarity | Type | Details |
|---|---|---|---|---|---|
| chimpanzee (Pan troglodytes) |
Mammalia | LOC738641 32 |
|
||
| -- 33 |
|
OneToOne | |||
| cow (Bos Taurus) |
Mammalia | LOC616782 32 |
|
||
| -- 33 |
|
OneToOne | |||
| dog (Canis familiaris) |
Mammalia | LOC102153019 32 |
|
||
| -- 33 |
|
OneToOne | |||
| platypus (Ornithorhynchus anatinus) |
Mammalia | -- 33 |
|
OneToOne | |
| oppossum (Monodelphis domestica) |
Mammalia | -- 33 |
|
OneToOne | |
| tropical clawed frog (Silurana tropicalis) |
Amphibia | LOC100496911 32 |
|
||
| zebrafish (Danio rerio) |
Actinopterygii | si:dkeyp-106c3.1 33 |
|
OneToOne | |
| LOC101882735 32 |
|
- Species where no ortholog for LOC400499 was found in the sources mined by GeneCards:
-
- A. gosspyii yeast (Ashbya gossypii)
- Actinobacteria (Mycobacterium tuberculosis)
- African clawed frog (Xenopus laevis)
- African malaria mosquito (Anopheles gambiae)
- Alicante grape (Vitis vinifera)
- alpha proteobacteria (Wolbachia pipientis)
- amoeba (Dictyostelium discoideum)
- Archea (Pyrococcus horikoshii)
- baker's yeast (Saccharomyces cerevisiae)
- barley (Hordeum vulgare)
- beta proteobacteria (Neisseria meningitidis)
- bread mold (Neurospora crassa)
- chicken (Gallus gallus)
- Chromalveolata (Phytophthora infestans)
- common water flea (Daphnia pulex)
- corn (Zea mays)
- E. coli (Escherichia coli)
- filamentous fungi (Aspergillus nidulans)
- Firmicute bacteria (Streptococcus pneumoniae)
- fission yeast (Schizosaccharomyces pombe)
- fruit fly (Drosophila melanogaster)
- green algae (Chlamydomonas reinhardtii)
- honey bee (Apis mellifera)
- K. lactis yeast (Kluyveromyces lactis)
- lizard (Anolis carolinensis)
- loblloly pine (Pinus taeda)
- malaria parasite (Plasmodium falciparum)
- medicago trunc (Medicago Truncatula)
- moss (Physcomitrella patens)
- mouse (Mus musculus)
- orangutan (Pongo pygmaeus)
- pig (Sus scrofa)
- rainbow trout (Oncorhynchus mykiss)
- rat (Rattus norvegicus)
- rice (Oryza sativa)
- rice blast fungus (Magnaporthe grisea)
- schistosome parasite (Schistosoma mansoni)
- sea anemone (Nematostella vectensis)
- sea squirt (Ciona intestinalis)
- sea squirt (Ciona savignyi)
- sea urchin (Strongylocentrotus purpuratus)
- sorghum (Sorghum bicolor)
- soybean (Glycine max)
- stem rust fungus (Puccinia graminis)
- sugarcane (Saccharum officinarum)
- thale cress (Arabidopsis thaliana)
- tomato (Lycopersicon esculentum)
- toxoplasmosis (Toxoplasma gondii)
- Trichoplax (Trichoplax adhaerens)
- wheat (Triticum aestivum)
- worm (Caenorhabditis elegans)
Paralogs for LOC400499 Gene
No data available for Paralogs for LOC400499 Gene
Variants for LOC400499 Gene
| SNP ID | Clin | Chr 16 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000006360 | -- | 11,412,608(-) | C/A/T | downstream_transcript_variant, genic_downstream_transcript_variant, intron_variant | |
| rs1000009588 | -- | 11,383,485(-) | C/T | genic_downstream_transcript_variant, intron_variant | |
| rs1000019351 | -- | 11,511,657(-) | T/G | genic_upstream_transcript_variant, intron_variant | |
| rs1000033877 | -- | 11,449,783(-) | G/A/C | intron_variant | |
| rs1000034551 | -- | 11,513,324(-) | G/T | genic_upstream_transcript_variant, intron_variant |
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC400499 Gene
Disorders for LOC400499 Gene
Additional Disease Information for LOC400499
- Genetic Association Database
- (GAD)
No disorders were found for LOC400499 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC400499 Gene
Publications for LOC400499 Gene
- A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome. (PMID: 28065597) Yao Z … Stagljar I (Molecular cell 2017) 3 56
- The sequence and analysis of duplication-rich human chromosome 16. (PMID: 15616553) Martin J … Pennacchio LA (Nature 2004) 13 56
No data available for External Links for LOC400499 Gene
Products for LOC400499 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC400499
- Origene Custom Protein Services for LOC400499
- Origene shrna and RNAi products in human, mouse, rat for LOC400499
- Browse OriGene Inhibitory RNA Products For LOC400499
- OriGene qPCR primer pairs for LOC400499
- Browse CRISPR knockouts for LOC400499
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC400499
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Novus Biologicals Antibodies for LOC400499
- Novus Biologicals proteins for LOC400499
- Browse Antibodies
- Browse Peptides and Proteins
- Browse Lysates
- Browse ELISA Kits
- Invitrogen Antibodies for LOC400499 (AFLGC-LOC400499)
- antibodies-online: Show 22 available Vitellogenin Antibodies ranked by validation data
- antibodies-online: Search results for available Vitellogenin related products ranked by validation data
- antibodies-online: Search results for available Vitellogenin related products ranked by validation data
- genomics-online: cdna clones - Search for available Vitellogenin CDNA products
- Overview of 4 available Vitellogenin gene related products
- Recommended
- orf clones - Search for available Vitellogenin ORF products
- Overview of 4 available Vitellogenin gene related products
- Recommended
- genomics-online: gRNA clones - Search for available Vitellogenin gRNA products
- Overview of 4 available Vitellogenin gene related products
- Recommended
- genomics-online: primer clones - Search for available Vitellogenin Primer products
- Overview of 4 available Vitellogenin gene related products
- Recommended
- genomics-online: shRNA clones - Search for available Vitellogenin shRNA products
- Overview of 4 available Vitellogenin gene related products
- Recommended
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for CRISPR/Cas9 clones, lentivirus and AAV products for LOC400499
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles and/or promoter clone products for LOC400499
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC400499
- Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC400499
Sources for LOC400499 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
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- (115) MedlinePlus
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- (118) NCBI Bookshelf
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- (125) ENCODE
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- (127) Horizon
- (128) NURSA
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- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
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- (159) Biocompare
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- (161) CTD^2 Dashboard
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- (165) Bio Basic
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- (180) MyBioSource