Aliases for LOC391247 Gene

Aliases for LOC391247 Gene

  • GINS Complex Subunit 2 (Psf2 Homolog) Pseudogene 3

External Ids for LOC391247 Gene

Previous GeneCards Identifiers for LOC391247 Gene

  • GC20U900084
  • GC20M037929
  • GC20M036663
  • GC20M037244

Summaries for LOC391247 Gene

GeneCards Summary for LOC391247 Gene

LOC391247 (GINS Complex Subunit 2 (Psf2 Homolog) Pseudogene) is a Pseudogene.

Additional gene information for LOC391247 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC391247 Gene

Genomics for LOC391247 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC391247 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J038617 Enhancer 0.4 Ensembl 600.7 -1.9 -1903 1 KDM1A ESR1 TBP ENSG00000213959 LOC391247 ADIG ARHGAP40 lnc-KIAA1755-9 SLC32A1
GH20J038646 Promoter/Enhancer 1.3 ENCODE CraniofacialAtlas 0.3 -30.8 -30761 0.3 SP1 GATAD2A CTCF TFE3 JUND LARP7 ZNF143 ZIC2 PKNOX1 ZNF24 lnc-KIAA1755-9 LOC391247 ARHGAP40 SLC32A1
GH20J038633 Enhancer 1 Ensembl ENCODE 0.4 -18.2 -18248 0.6 GATAD2A CTCF PRDM10 KDM1A RCOR2 JUND ZNF143 REST RAD21 IRF2 ARHGAP40 LOC391247 lnc-KIAA1755-9 SLC32A1
GH20J038628 Enhancer 0.6 Ensembl ENCODE 0.4 -13.5 -13474 0.8 GABPA NR2C2 BCOR ZNF518A ZMYM3 NR2C1 ARHGAP40 LOC391247 lnc-KIAA1755-9 SLC32A1
GH20J038631 Enhancer 0.5 Ensembl 0.4 -16.2 -16168 0.2 ZNF766 ZFHX2 GLIS1 SP1 EGR2 LOC391247 ARHGAP40 lnc-KIAA1755-9 SLC32A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC391247 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC391247 Gene

Genomic Locations for LOC391247 Gene
chr20:38,614,371-38,615,532
(GRCh38/hg38)
Size:
1,162 bases
Orientation:
Minus strand
chr20:37,243,006-37,244,203
(GRCh37/hg19)
Size:
1,198 bases
Orientation:
Minus strand

Genomic View for LOC391247 Gene

Genes around LOC391247 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC391247 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC391247 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC391247 Gene

Proteins for LOC391247 Gene

Post-translational modifications for LOC391247 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC391247 Gene

Domains & Families for LOC391247 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC391247 Gene

Function for LOC391247 Gene

miRNA for LOC391247 Gene

miRTarBase miRNAs that target LOC391247

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for LOC391247 Gene

Localization for LOC391247 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC391247 Gene

Pathways & Interactions for LOC391247 Gene

PathCards logo

SuperPathways for LOC391247 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC391247 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC391247 Gene

Drugs & Compounds for LOC391247 Gene

No Compound Related Data Available

Transcripts for LOC391247 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC391247 Gene

No ASD Table

Relevant External Links for LOC391247 Gene

GeneLoc Exon Structure for
LOC391247

No data available for mRNA/cDNA for LOC391247 Gene

Expression for LOC391247 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC391247 Gene

genes like me logo Genes that share expression patterns with LOC391247: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC391247 Gene

Orthologs for LOC391247 Gene

No data available for Orthologs and Evolution for LOC391247 Gene

Paralogs for LOC391247 Gene

No data available for Paralogs for LOC391247 Gene

Variants for LOC391247 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC391247 Gene

Disorders for LOC391247 Gene

No disorders were found for LOC391247 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC391247 Gene

Publications for LOC391247 Gene

No publications were found for LOC391247 Gene.

No data available for Mastermind for LOC391247 Gene

Products for LOC391247 Gene

Sources for LOC391247 Gene