Aliases for LOC390876 Gene

Aliases for LOC390876 Gene

  • Ribosomal Protein L35 Pseudogene 3

External Ids for LOC390876 Gene

Previous GeneCards Identifiers for LOC390876 Gene

  • GC19U900116
  • GC19P003077
  • GC19P003074
  • GC19P003131
  • GC19P003133
  • GC19P003141
  • GC19P003145

Summaries for LOC390876 Gene

GeneCards Summary for LOC390876 Gene

LOC390876 (Ribosomal Protein L35 Pseudogene) is a Pseudogene.

Additional gene information for LOC390876 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC390876 Gene

Genomics for LOC390876 Gene

GeneHancer (GH) Regulatory Elements for LOC390876 Gene

Promoters and enhancers for LOC390876 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J003129 Enhancer 0.3 ENCODE 500.7 -0.8 -781 0 PRDM10 AC005262 ENSG00000266944 LOC390876 lnc-GNA15-1 ENSG00000267688
GH19J003131 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 +3.8 3754 8.4 ZBTB40 SP1 EP300 ZIC2 POLR2A ZBTB11 MEF2C REST TRIM22 RBM25 GNA15 NMRK2 FZR1 AC005262 ENSG00000266944 LOC390876 lnc-AES-7 lnc-GNA15-1 LOC100996351
GH19J003126 Enhancer 0.8 ENCODE 0.7 -4.5 -4472 0.2 CTCF ZNF623 GABPA REST KLF7 TGIF2 TRIM22 SMC3 HDAC2 ZNF341 GNA11 CACTIN ZNF77 SF3A2 S1PR4 NCLN TLE5 CACTIN-AS1 ENSG00000267688 LOC390876
GH19J003125 Enhancer 0.7 ENCODE 0.4 -5.3 -5322 0.2 EP300 BCL11A TCF12 POLR2G MEF2B NBN IRF4 EBF1 IKZF1 BMI1 GNA11 S1PR4 NCLN TLE5 ENSG00000267688 LOC390876
GH19J003123 Enhancer 0.5 dbSUPER 0.4 -6.5 -6516 0.9 POLR2G SMARCA5 HIC1 ZNF146 RXRA AGO2 HNRNPL ZNF121 SP1 GNA11 ENSG00000267688 lnc-GNA15-3 LOC390876
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC390876 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC390876 Gene

Genomic Locations for LOC390876 Gene
chr19:3,130,670-3,131,437
(GRCh38/hg38)
Size:
768 bases
Orientation:
Plus strand
chr19:3,130,671-3,131,455
(GRCh37/hg19)
Size:
785 bases
Orientation:
Plus strand

Genomic View for LOC390876 Gene

Genes around LOC390876 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC390876 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC390876 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC390876 Gene

Proteins for LOC390876 Gene

Post-translational modifications for LOC390876 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC390876 Gene

Domains & Families for LOC390876 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC390876 Gene

Function for LOC390876 Gene

Phenotypes From GWAS Catalog for LOC390876 Gene

genes like me logo Genes that share phenotypes with LOC390876: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC390876 Gene

Localization for LOC390876 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC390876 Gene

Pathways & Interactions for LOC390876 Gene

PathCards logo

SuperPathways for LOC390876 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC390876 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC390876 Gene

Drugs & Compounds for LOC390876 Gene

No Compound Related Data Available

Transcripts for LOC390876 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC390876 Gene

No ASD Table

Relevant External Links for LOC390876 Gene

GeneLoc Exon Structure for
LOC390876

No data available for mRNA/cDNA for LOC390876 Gene

Expression for LOC390876 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC390876 Gene

genes like me logo Genes that share expression patterns with LOC390876: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC390876 Gene

Orthologs for LOC390876 Gene

No data available for Orthologs and Evolution for LOC390876 Gene

Paralogs for LOC390876 Gene

No data available for Paralogs for LOC390876 Gene

Variants for LOC390876 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC390876 Gene

Disorders for LOC390876 Gene

No disorders were found for LOC390876 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC390876 Gene

Publications for LOC390876 Gene

No publications were found for LOC390876 Gene.

No data available for Mastermind for LOC390876 Gene

Products for LOC390876 Gene

Sources for LOC390876 Gene