Aliases for LOC390806 Gene

Aliases for LOC390806 Gene

  • Family With Sequence Similarity 136 Member A Pseudogene 3

External Ids for LOC390806 Gene

Previous GeneCards Identifiers for LOC390806 Gene

  • GC17U900052
  • GC17M062162
  • GC17M059041
  • GC17M061687

Summaries for LOC390806 Gene

GeneCards Summary for LOC390806 Gene

LOC390806 (Family With Sequence Similarity 136 Member A Pseudogene) is a Pseudogene.

Additional gene information for LOC390806 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC390806 Gene

Genomics for LOC390806 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC390806 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J063612 Enhancer 1.1 Ensembl ENCODE 600.7 +0.0 23 3.2 CEBPG GATAD2A CTCF TFE3 RCOR2 JUND ZNF143 RXRB REST RAD21 ENSG00000270587 LOC390806 lnc-STRADA-3 FTSJ3 CYB561 ACE PPIAP55 DCAF7 MAP3K3 TACO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC390806 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the LOC390806 gene promoter:
  • AhR
  • AP-1
  • Arnt
  • c-Fos
  • c-Jun
  • FosB
  • Fra-1
  • GATA-6
  • POU2F1
  • POU2F1a

Genomic Locations for LOC390806 Gene

Genomic Locations for LOC390806 Gene
652 bases
Minus strand
418 bases
Minus strand

Genomic View for LOC390806 Gene

Genes around LOC390806 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC390806 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC390806 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC390806 Gene

Proteins for LOC390806 Gene

Post-translational modifications for LOC390806 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC390806 Gene

Domains & Families for LOC390806 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC390806 Gene

Function for LOC390806 Gene

Phenotypes From GWAS Catalog for LOC390806 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC390806 Gene

Localization for LOC390806 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC390806 Gene

Pathways & Interactions for LOC390806 Gene

PathCards logo

SuperPathways for LOC390806 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC390806 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC390806 Gene

Drugs & Compounds for LOC390806 Gene

No Compound Related Data Available

Transcripts for LOC390806 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC390806 Gene

No ASD Table

Relevant External Links for LOC390806 Gene

GeneLoc Exon Structure for

No data available for mRNA/cDNA for LOC390806 Gene

Expression for LOC390806 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC390806 Gene

genes like me logo Genes that share expression patterns with LOC390806: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC390806 Gene

Orthologs for LOC390806 Gene

No data available for Orthologs and Evolution for LOC390806 Gene

Paralogs for LOC390806 Gene

No data available for Paralogs for LOC390806 Gene

Variants for LOC390806 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC390806 Gene

Disorders for LOC390806 Gene

No disorders were found for LOC390806 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC390806 Gene

Publications for LOC390806 Gene

No publications were found for LOC390806 Gene.

No data available for Mastermind for LOC390806 Gene

Products for LOC390806 Gene

Sources for LOC390806 Gene