Aliases for LOC390250 Gene

Aliases for LOC390250 Gene

  • RNA Polymerase II, I And III Subunit E Pseudogene 3
  • Polymerase (RNA) II Subunit E Pseudogene 3
  • RNA Polymerase II Subunit E Pseudogene 3

External Ids for LOC390250 Gene

Previous GeneCards Identifiers for LOC390250 Gene

  • GC11U900453
  • GC11P109458
  • GC11P109425
  • GC11P109920

Summaries for LOC390250 Gene

GeneCards Summary for LOC390250 Gene

LOC390250 (RNA Polymerase II, I And III Subunit E Pseudogene) is a Pseudogene.

Additional gene information for LOC390250 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC390250 Gene

Genomics for LOC390250 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC390250 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J110046 Enhancer 0.6 Ensembl ENCODE 0.7 -2.3 -2346 1.2 NFE2 ATF1 ATF2 ZC3H12C LOC390250 RF00017-926 lnc-ZC3H12C-5 LOC107984384 RDX C11orf87
GH11J110039 Enhancer 0.2 Ensembl 0.4 -9.7 -9720 0.4 ZC3H12C RF00017-926 LOC390250 lnc-ZC3H12C-5 LOC107984384 RDX C11orf87
GH11J110036 Enhancer 0.2 Ensembl 0.4 -12.5 -12520 0.4 RF00017-926 ZC3H12C LOC390250 lnc-ZC3H12C-5 LOC107984384 RDX C11orf87
GH11J110037 Enhancer 0.2 Ensembl 0.4 -11.5 -11520 0.8 RF00017-926 ZC3H12C LOC390250 lnc-ZC3H12C-5 LOC107984384 RDX C11orf87
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC390250 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC390250 Gene

Latest Assembly
chr11:110,049,521-110,050,353
(GRCh38/hg38)
Size:
833 bases
Orientation:
Plus strand

Previous Assembly
chr11:109,920,246-109,921,078
(GRCh37/hg19 by Entrez Gene)
Size:
833 bases
Orientation:
Plus strand

Genomic View for LOC390250 Gene

Genes around LOC390250 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC390250 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC390250 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC390250 Gene

Proteins for LOC390250 Gene

Post-translational modifications for LOC390250 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC390250 Gene

Domains & Families for LOC390250 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC390250 Gene

Function for LOC390250 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC390250 Gene

Localization for LOC390250 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC390250 Gene

Pathways & Interactions for LOC390250 Gene

PathCards logo

SuperPathways for LOC390250 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC390250 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC390250 Gene

Drugs & Compounds for LOC390250 Gene

No Compound Related Data Available

Transcripts for LOC390250 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC390250 Gene

No ASD Table

Relevant External Links for LOC390250 Gene

GeneLoc Exon Structure for
LOC390250

No data available for mRNA/cDNA for LOC390250 Gene

Expression for LOC390250 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC390250 Gene

genes like me logo Genes that share expression patterns with LOC390250: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC390250 Gene

Orthologs for LOC390250 Gene

No data available for Orthologs and Evolution for LOC390250 Gene

Paralogs for LOC390250 Gene

No data available for Paralogs for LOC390250 Gene

Variants for LOC390250 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC390250 Gene

Disorders for LOC390250 Gene

No disorders were found for LOC390250 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC390250 Gene

Publications for LOC390250 Gene

No publications were found for LOC390250 Gene.

No data available for Mastermind for LOC390250 Gene

Products for LOC390250 Gene

Sources for LOC390250 Gene