Aliases for LOC390029 Gene

Aliases for LOC390029 Gene

  • Actin Beta Pseudogene 3

External Ids for LOC390029 Gene

Previous GeneCards Identifiers for LOC390029 Gene

  • GC11U900749
  • GC11M001789
  • GC11M001780

Summaries for LOC390029 Gene

GeneCards Summary for LOC390029 Gene

LOC390029 (Actin Beta Pseudogene) is a Pseudogene.

Additional gene information for LOC390029 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC390029 Gene

Genomics for LOC390029 Gene

GeneHancer (GH) Regulatory Elements for LOC390029 Gene

Promoters and enhancers for LOC390029 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J001826 Enhancer 1 ENCODE dbSUPER 0.4 -21.0 -21012 0.2 CTCF GABPA REST ZBTB7A SKI MYC SMC3 SIN3A NR2F2 RXRA SYT8 LOC390029
GH11J001820 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -16.6 -16585 1.4 ZBTB17 ZBTB40 ZNF366 SYT8 LOC390029
GH11J001806 Enhancer 0.5 Ensembl 0.4 -6.4 -6407 8.8 AFF1 CTCF RAD21 POLR2A KLF1 HLF ZNF512 ZNF770 IFITM10 ENSG00000235027 TNNI2 ENSG00000229512 ENSG00000250644 CTSD MRPL23-AS1 FAM99B LINC01219 H19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC390029 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC390029 Gene

Genomic Locations for LOC390029 Gene
chr11:1,802,595-1,804,194
(GRCh38/hg38)
Size:
1,600 bases
Orientation:
Minus strand
chr11:1,824,119-1,825,325
(GRCh37/hg19)
Size:
1,207 bases
Orientation:
Minus strand

Genomic View for LOC390029 Gene

Genes around LOC390029 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC390029 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC390029 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC390029 Gene

Proteins for LOC390029 Gene

Post-translational modifications for LOC390029 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC390029 Gene

Domains & Families for LOC390029 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC390029 Gene

Function for LOC390029 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC390029 Gene

Localization for LOC390029 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC390029 Gene

Pathways & Interactions for LOC390029 Gene

PathCards logo

SuperPathways for LOC390029 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC390029 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC390029 Gene

Drugs & Compounds for LOC390029 Gene

No Compound Related Data Available

Transcripts for LOC390029 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC390029 Gene

No ASD Table

Relevant External Links for LOC390029 Gene

GeneLoc Exon Structure for
LOC390029

No data available for mRNA/cDNA for LOC390029 Gene

Expression for LOC390029 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC390029 Gene

mRNA differential expression in normal tissues according to GTEx for LOC390029 Gene

This gene is overexpressed in Testis (x49.4).
genes like me logo Genes that share expression patterns with LOC390029: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC390029 Gene

Orthologs for LOC390029 Gene

No data available for Orthologs and Evolution for LOC390029 Gene

Paralogs for LOC390029 Gene

No data available for Paralogs for LOC390029 Gene

Variants for LOC390029 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC390029 Gene

Disorders for LOC390029 Gene

No disorders were found for LOC390029 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC390029 Gene

Publications for LOC390029 Gene

No publications were found for LOC390029 Gene.

No data available for Mastermind for LOC390029 Gene

Products for LOC390029 Gene

Sources for LOC390029 Gene