Aliases for LOC388734 Gene

Aliases for LOC388734 Gene

  • PRELI Domain Containing 1 Pseudogene 3
  • PX19 Pseudogene 3

External Ids for LOC388734 Gene

Previous GeneCards Identifiers for LOC388734 Gene

  • GC01U900930
  • GC01P208460
  • GC01P207768
  • GC01P209447
  • GC01P211381

Summaries for LOC388734 Gene

GeneCards Summary for LOC388734 Gene

LOC388734 (PRELI Domain Containing 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC388734 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC388734 Gene

Genomics for LOC388734 Gene

GeneHancer (GH) Regulatory Elements for LOC388734 Gene

Promoters and enhancers for LOC388734 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J211207 Promoter 0.6 Ensembl 500.7 +0.1 137 0.4 ZNF316 TRIM28 MAFG ZBTB33 ZNF507 MAFK ENSG00000226986 ENSG00000284376 LOC388734 piR-44373-001 piR-60466-001 LINC00467
GH01J211197 Enhancer 0.6 Ensembl ENCODE 0.4 -8.5 -8523 1.3 FOSL2 NR3C1 FOS GATA2 FOXA1 ZNF24 SERTAD4 ENSG00000284376 LOC388734 ENSG00000283952
GH01J211188 Enhancer 0.4 Ensembl 0.4 -18.1 -18063 1.6 SMARCA5 SPI1 BHLHE40 ENSG00000283952 SERTAD4 ENSG00000284376 LOC388734
GH01J211198 Enhancer 0.3 Ensembl 0.4 -9.6 -9564 0.6 BHLHE40 ENSG00000283952 ENSG00000284376 LOC388734
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC388734 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC388734 Gene

Genomic Locations for LOC388734 Gene
chr1:211,207,064-211,208,286
(GRCh38/hg38)
Size:
1,223 bases
Orientation:
Plus strand
chr1:211,380,389-211,381,619
(GRCh37/hg19)
Size:
1,231 bases
Orientation:
Plus strand

Genomic View for LOC388734 Gene

Genes around LOC388734 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC388734 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC388734 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC388734 Gene

Proteins for LOC388734 Gene

Post-translational modifications for LOC388734 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC388734 Gene

Domains & Families for LOC388734 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC388734 Gene

Function for LOC388734 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC388734 Gene

Localization for LOC388734 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC388734 Gene

Pathways & Interactions for LOC388734 Gene

PathCards logo

SuperPathways for LOC388734 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC388734 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC388734 Gene

Drugs & Compounds for LOC388734 Gene

No Compound Related Data Available

Transcripts for LOC388734 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC388734 Gene

No ASD Table

Relevant External Links for LOC388734 Gene

GeneLoc Exon Structure for
LOC388734

No data available for mRNA/cDNA for LOC388734 Gene

Expression for LOC388734 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC388734 Gene

genes like me logo Genes that share expression patterns with LOC388734: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC388734 Gene

Orthologs for LOC388734 Gene

This gene was present in the common ancestor of chordates.

Orthologs for LOC388734 Gene

Organism Taxonomy Gene Similarity Type Details
tropical clawed frog
(Silurana tropicalis)
Amphibia Str.15291 30
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.6187 30
Species where no ortholog for LOC388734 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

No data available for Evolution for LOC388734 Gene

Paralogs for LOC388734 Gene

No data available for Paralogs for LOC388734 Gene

Variants for LOC388734 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC388734 Gene

Disorders for LOC388734 Gene

No disorders were found for LOC388734 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC388734 Gene

Publications for LOC388734 Gene

No publications were found for LOC388734 Gene.

No data available for Mastermind for LOC388734 Gene

Products for LOC388734 Gene

Sources for LOC388734 Gene