LOC387770 Gene (Pseudogene)

Tripartite Motif Containing 49D1 Pseudogene

GC11M061187
GIFtS:
2
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Aliases for LOC387770 Gene

Aliases for LOC387770 Gene

  • Tripartite Motif Containing 49D1 Pseudogene 3
  • Ring Finger Protein 18-Like Pseudogene 3

External Ids for LOC387770 Gene

Previous GeneCards Identifiers for LOC387770 Gene

  • GC11U900524
  • GC11P055422
  • GC11P055403
  • GC11M049822
  • GC11M049865
  • GC11M050557
  • GC11M050600
  • GC11M055853
  • GC11M056098
  • GC11M056241
  • GC11M059749
  • GC11M050835
  • GC11M051627
  • GC11M052289
  • GC11M052949
  • GC11M053618
  • GC11M054283
  • GC11M054950
  • GC11M055657

Summaries for LOC387770 Gene

GeneCards Summary for LOC387770 Gene

LOC387770 (Tripartite Motif Containing 49D1 Pseudogene) is a Pseudogene.

Additional gene information for LOC387770 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC387770 Gene

Genomics for LOC387770 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC387770 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J049851 Enhancer 0.2 FANTOM5 0.4 +9.2 9174 0.1 ENSG00000288177 ENSG00000255042 FOLH1 LOC100652976 ENSG00000255550 LOC387770 lnc-OR4C12-7 OR4C13
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC387770 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC387770 Gene

Genomic Locations for LOC387770 Gene
chr11:49,843,962-49,861,219
(GRCh38/hg38)
Size:
17,258 bases
Orientation:
Minus strand
chr11:49,865,514-49,882,771
(GRCh37/hg19)
Size:
17,258 bases
Orientation:
Minus strand

Genomic View for LOC387770 Gene

Genes around LOC387770 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC387770 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC387770 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC387770 Gene

Proteins for LOC387770 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC387770 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC387770 Gene

Domains & Families for LOC387770 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC387770 Gene

Function for LOC387770 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC387770 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC387770 Gene

Localization for LOC387770 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC387770 Gene

Pathways & Interactions for LOC387770 Gene

PathCards logo

SuperPathways for LOC387770 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC387770 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC387770 Gene

Drugs & Compounds for LOC387770 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC387770 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC387770 Gene

No ASD Table

Relevant External Links for LOC387770 Gene

GeneLoc Exon Structure for
LOC387770

No data available for mRNA/cDNA for LOC387770 Gene

Expression for LOC387770 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC387770 Gene

mRNA expression in normal human tissues for LOC387770 Gene
genes like me logo Genes that share expression patterns with LOC387770: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC387770 Gene

Orthologs for LOC387770 Gene

No data available for Orthologs and Evolution for LOC387770 Gene

Paralogs for LOC387770 Gene

No data available for Paralogs for LOC387770 Gene

Variants for LOC387770 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC387770 Gene

Disorders for LOC387770 Gene

No disorders were found for LOC387770 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC387770 Gene

Publications for LOC387770 Gene

No publications were found for LOC387770 Gene.

No data available for Mastermind for LOC387770 Gene

Products for LOC387770 Gene

Sources for LOC387770 Gene