Aliases for LOC343052 Gene

Aliases for LOC343052 Gene

  • Immunoglobulin Superfamily DCC Subclass Member 3 Pseudogene 3

External Ids for LOC343052 Gene

Previous GeneCards Identifiers for LOC343052 Gene

  • GC00U908550
  • GC01P150541
  • GC01P150984
  • GC01P150579
  • GC01P152033
  • GC01P153766

Summaries for LOC343052 Gene

GeneCards Summary for LOC343052 Gene

LOC343052 (Immunoglobulin Superfamily DCC Subclass Member 3 Pseudogene) is a Pseudogene.

Additional gene information for LOC343052 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC343052 Gene

Genomics for LOC343052 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC343052 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC343052 on the GeneHancer Hub at the UCSC Golden Path

Top Transcription factor binding sites by QIAGEN in the LOC343052 gene promoter:
  • AML1a
  • AREB6
  • Bach1
  • CREB
  • deltaCREB
  • HEN1
  • HNF-4alpha1
  • LCR-F1
  • MyoD

Genomic Locations for LOC343052 Gene

Genomic Locations for LOC343052 Gene
chr1:153,793,947-153,796,302
(GRCh38/hg38)
Size:
2,356 bases
Orientation:
Plus strand
chr1:153,766,423-153,774,580
(GRCh37/hg19)
Size:
8,158 bases
Orientation:
Plus strand

Genomic View for LOC343052 Gene

Genes around LOC343052 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC343052 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC343052 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC343052 Gene

Proteins for LOC343052 Gene

Post-translational modifications for LOC343052 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC343052 Gene

Domains & Families for LOC343052 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC343052 Gene

Function for LOC343052 Gene

Phenotypes From GWAS Catalog for LOC343052 Gene

Phenotypes for LOC343052 Gene

genes like me logo Genes that share phenotypes with LOC343052: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC343052 Gene

Localization for LOC343052 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC343052 Gene

Pathways & Interactions for LOC343052 Gene

PathCards logo

SuperPathways for LOC343052 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC343052 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC343052 Gene

Drugs & Compounds for LOC343052 Gene

No Compound Related Data Available

Transcripts for LOC343052 Gene

mRNA/cDNA for LOC343052 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC343052 Gene

No ASD Table

Relevant External Links for LOC343052 Gene

GeneLoc Exon Structure for
LOC343052

Expression for LOC343052 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC343052 Gene

mRNA differential expression in normal tissues according to GTEx for LOC343052 Gene

This gene is overexpressed in Ovary (x5.2).
genes like me logo Genes that share expression patterns with LOC343052: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC343052 Gene

Orthologs for LOC343052 Gene

No data available for Orthologs and Evolution for LOC343052 Gene

Paralogs for LOC343052 Gene

No data available for Paralogs for LOC343052 Gene

Variants for LOC343052 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC343052 Gene

Disorders for LOC343052 Gene

Additional Disease Information for LOC343052

Genetic Association Database
(GAD)

No disorders were found for LOC343052 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC343052 Gene

Publications for LOC343052 Gene

  1. Genome-wide association study of conduct disorder symptomatology. (PMID: 20585324) Dick DM … Bierut L (Molecular psychiatry 2011) 3 41
  2. Genome-wide association identifies genetic variants associated with lentiform nucleus volume in N = 1345 young and elderly subjects. (PMID: 22903471) Hibar DP … Alzheimer’s Disease Neuroimaging Initiative (Brain imaging and behavior 2013) 3
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R … Stanton LW (Nature biotechnology 2004) 3

No data available for Mastermind for LOC343052 Gene

Products for LOC343052 Gene

Sources for LOC343052 Gene