Free for academic non-profit institutions. Other users need a Commercial license
Aliases for LOC341056 Gene
Summaries for LOC341056 Gene
GeneCards Summary for LOC341056 Gene
LOC341056 (SUMO1 Activating Enzyme Subunit 1 Pseudogene) is a Pseudogene.
Additional gene information for LOC341056 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC341056 Gene
Genomics for LOC341056 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC341056 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH11J123010 | Enhancer | 0.4 | Ensembl ENCODE | 0.4 | -6.0 | -5954 | 1.7 | ZNF133 | LOC341056 MF588795 BSX HSPA8 | |
| GH11J123006 | Enhancer | 0.3 | Ensembl | 0.4 | -10.8 | -10765 | 1.2 | CTCF | MF588795 LOC341056 BSX HSPA8 | |
| GH11J123003 | Enhancer | 0.2 | ENCODE | 0.4 | -13.9 | -13918 | 0.2 | MF588795 JHY CRTAM LOC341056 BSX HSPA8 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC341056 on the GeneHancer Hub at the UCSC Golden Path
- Top Transcription factor binding sites by QIAGEN in the LOC341056 gene promoter:
-
- Chx10
- Evi-1
- FOXO3
- FOXO3a
- FOXO3b
- IRF-7A
- Sox9
Genomic Locations for LOC341056 Gene
Genomic Locations for LOC341056 Gene
- chr11:123,017,566-123,019,611
- (GRCh38/hg38)
- Size:
- 2,046 bases
- Orientation:
- Plus strand
- chr11:122,888,274-122,890,319
- (GRCh37/hg19)
- Size:
- 2,046 bases
- Orientation:
- Plus strand
Genomic View for LOC341056 Gene
Genes around LOC341056 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 11q24.1 by Entrez Gene
LOC341056 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC341056 Gene
Proteins for LOC341056 Gene
Post-translational modifications for LOC341056 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC341056
- Origene Custom Protein Services for LOC341056
No data available for DME Specific Peptides for LOC341056 Gene
Domains & Families for LOC341056 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC341056 Gene
Function for LOC341056 Gene
Phenotypes for LOC341056 Gene
- GenomeRNAi human phenotypes for LOC341056:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LOC341056
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC341056 Gene
Localization for LOC341056 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC341056 Gene
Transcripts for LOC341056 Gene
mRNA/cDNA for LOC341056 Gene
- 2 NCBI additional mRNA sequence :
CRISPR Products
- Browse CRISPR knockouts for LOC341056
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC341056 Gene
- GeneLoc Exon Structure for
- LOC341056
Expression for LOC341056 Gene
mRNA differential expression in normal tissues according to GTEx for LOC341056 Gene
This gene is overexpressed in Testis (x49.1).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC341056
SOURCE GeneReport for Unigene cluster for LOC341056 Gene:
Hs.620309Primer Products
-
OriGene qPCR primer pairs for LOC341056
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC341056 Gene
Orthologs for LOC341056 Gene
No data available for Orthologs and Evolution for LOC341056 Gene
Paralogs for LOC341056 Gene
No data available for Paralogs for LOC341056 Gene
Variants for LOC341056 Gene
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| nsv1039284 | CNV | gain | 25217958 |
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Variation tolerance and Additional Variant Information for LOC341056 Gene
Disorders for LOC341056 Gene
No disorders were found for LOC341056 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC341056 Gene
Publications for LOC341056 Gene
No publications were found for LOC341056 Gene.
No data available for Mastermind for LOC341056 Gene
Products for LOC341056 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC341056
- Origene Custom Protein Services for LOC341056
- Browse OriGene Inhibitory RNA Products For LOC341056
- OriGene qPCR primer pairs for LOC341056
- Browse CRISPR knockouts for LOC341056
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC341056
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC341056
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC341056
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC341056
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC341056
Sources for LOC341056 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB