Aliases for LOC286059 Gene

Aliases for LOC286059 Gene

  • TNF Receptor Superfamily Member 10d Pseudogene 3
  • Tumor Necrosis Factor Receptor Superfamily Member 10d, Decoy With Truncated Death Domain Pseudogene 3
  • Novel Transcript 5
  • NONHSAG049749.2 91
  • Lnc-TNFRSF10C-1 165
  • HSALNG0063955 164
  • AC107959.2 5

External Ids for LOC286059 Gene

Previous GeneCards Identifiers for LOC286059 Gene

  • GC08P023279
  • GC08P022746
  • GC08U900359
  • GC08P022926

Summaries for LOC286059 Gene

GeneCards Summary for LOC286059 Gene

LOC286059 (TNF Receptor Superfamily Member 10d Pseudogene) is a Pseudogene.

Additional gene information for LOC286059 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC286059 Gene

Genomics for LOC286059 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC286059 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC286059 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC286059 Gene

Genomic Locations for LOC286059 Gene
chr8:23,068,229-23,083,619
(GRCh38/hg38)
Size:
15,391 bases
Orientation:
Plus strand
chr8:22,925,742-22,941,132
(GRCh37/hg19)
Size:
15,391 bases
Orientation:
Plus strand

Genomic View for LOC286059 Gene

Genes around LOC286059 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC286059 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC286059 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC286059 Gene

Proteins for LOC286059 Gene

Post-translational modifications for LOC286059 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC286059 Gene

Domains & Families for LOC286059 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC286059 Gene

Function for LOC286059 Gene

Phenotypes From GWAS Catalog for LOC286059 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC286059 Gene

Localization for LOC286059 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC286059 Gene

Pathways & Interactions for LOC286059 Gene

PathCards logo

SuperPathways for LOC286059 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC286059 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC286059 Gene

Drugs & Compounds for LOC286059 Gene

No Compound Related Data Available

Transcripts for LOC286059 Gene

mRNA/cDNA for LOC286059 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 RNACentral transcripts :
2 NONCODE transcripts :
3 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC286059 Gene

No ASD Table

Relevant External Links for LOC286059 Gene

GeneLoc Exon Structure for
LOC286059

Expression for LOC286059 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC286059 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC286059

SOURCE GeneReport for Unigene cluster for LOC286059 Gene:

Hs.306673
genes like me logo Genes that share expression patterns with LOC286059: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC286059 Gene

Orthologs for LOC286059 Gene

Evolution for LOC286059 Gene

ENSEMBL:
Gene Tree for LOC286059 (if available)
TreeFam:
Gene Tree for LOC286059 (if available)

No data available for Orthologs for LOC286059 Gene

Paralogs for LOC286059 Gene

No data available for Paralogs for LOC286059 Gene

Variants for LOC286059 Gene

Structural Variations from Database of Genomic Variants (DGV) for LOC286059 Gene

Variant ID Type Subtype PubMed ID
dgv12057n54 CNV loss 21841781
esv2736750 CNV deletion 23290073
esv2736752 CNV deletion 23290073
esv2759604 CNV loss 17122850
esv3616621 CNV loss 21293372
nsv1015967 CNV loss 25217958
nsv1017570 CNV gain 25217958
nsv1025279 CNV loss 25217958
nsv1025672 CNV gain 25217958
nsv1027718 CNV gain 25217958
nsv1128408 CNV deletion 24896259
nsv520728 CNV loss 19592680
nsv610775 CNV loss 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Variation tolerance and Additional Variant Information for LOC286059 Gene

Disorders for LOC286059 Gene

Additional Disease Information for LOC286059

No disorders were found for LOC286059 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC286059 Gene

Publications for LOC286059 Gene

  1. Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects. (PMID: 24324551) Deng X … REDSII Chagas Study Group from the NHLBI Retrovirus Epidemiology Donor Study-II Component International (PloS one 2013) 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3

No data available for Mastermind for LOC286059 Gene

Products for LOC286059 Gene

Sources for LOC286059 Gene