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Aliases for LOC285191 Gene

Subcategory (RNA class) for LOC285191 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC285191 Gene

  • Uncharacterized LOC285191 3
  • AC011298.1 5

External Ids for LOC285191 Gene

Previous GeneCards Identifiers for LOC285191 Gene

  • GC02M240692
  • GC02P241646
  • GC02U900587
  • GC02P241275

Summaries for LOC285191 Gene

GeneCards Summary for LOC285191 Gene

LOC285191 (Uncharacterized LOC285191) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC285191 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC285191 Gene

Genomics for LOC285191 Gene

GeneHancer (GH) Regulatory Elements for LOC285191 Gene

Promoters and enhancers for LOC285191 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I240685 Enhancer 0.6 ENCODE dbSUPER 576.7 +0.6 606 1.5 CTCF ZBTB48 LOC285191 AQP12B AQP12A
GH02I240620 Promoter/Enhancer 1.9 EPDnew FANTOM5 Ensembl ENCODE 9 -61.9 -61949 7.2 PKNOX1 MLX ARID4B DMAP1 IRF4 ZNF48 ZNF121 ZNF143 ATF7 RUNX3 GPR35 DUSP28 CAPN10 LOC285191 PASK AQP12B AQP12A MTERF4 RNPEPL1 LOC100420500
GH02I240646 Enhancer 0.9 FANTOM5 ENCODE 8.3 -39.4 -39408 0.5 PKNOX1 ATF1 NCOA1 GABPA MTA3 TARDBP GABPB1 CREB1 CREM LOC285191 DUSP28 GPR35 CAPN10 MTERF4 LOC100420500
GH02I240691 Promoter/Enhancer 0.7 EPDnew dbSUPER 9.2 +5.9 5905 0.1 AQP12A LOC285191 ENSG00000274977
GH02I240656 Enhancer 0.5 Ensembl 11.3 -29.3 -29341 0.4 SP1 NRF1 MAX JUNB BATF RUNX3 LOC285191 KIF1A LOC100420500 GPR35
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC285191 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC285191 Gene

Genomic Locations for LOC285191 Gene
chr2:240,685,942-240,690,414
(GRCh38/hg38)
Size:
4,473 bases
Orientation:
Plus strand

Genomic View for LOC285191 Gene

Genes around LOC285191 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC285191 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC285191 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC285191 Gene

Proteins for LOC285191 Gene

Post-translational modifications for LOC285191 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC285191 Gene

Domains & Families for LOC285191 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC285191 Gene

Function for LOC285191 Gene

Phenotypes From GWAS Catalog for LOC285191 Gene

Phenotypes for LOC285191 Gene

GenomeRNAi human phenotypes for LOC285191:
genes like me logo Genes that share phenotypes with LOC285191: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC285191 Gene

Localization for LOC285191 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC285191 Gene

Pathways & Interactions for LOC285191 Gene

SuperPathways for LOC285191 Gene

No Data Available

Interacting Proteins for LOC285191 Gene

Gene Ontology (GO) - Biological Process for LOC285191 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC285191 Gene

Drugs & Compounds for LOC285191 Gene

No Compound Related Data Available

Transcripts for LOC285191 Gene

mRNA/cDNA for LOC285191 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for LOC285191 Gene

Uncharacterized LOC285191:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC285191 Gene

No ASD Table

Relevant External Links for LOC285191 Gene

GeneLoc Exon Structure for
LOC285191

Expression for LOC285191 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC285191 Gene

SOURCE GeneReport for Unigene cluster for LOC285191 Gene:

Hs.729906
genes like me logo Genes that share expression patterns with LOC285191: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC285191 Gene

Orthologs for LOC285191 Gene

Evolution for LOC285191 Gene

ENSEMBL:
Gene Tree for LOC285191 (if available)
TreeFam:
Gene Tree for LOC285191 (if available)

No data available for Orthologs for LOC285191 Gene

Paralogs for LOC285191 Gene

No data available for Paralogs for LOC285191 Gene

Variants for LOC285191 Gene

Sequence variations from dbSNP and Humsavar for LOC285191 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000056981 -- 240,686,803(+) T/A non_coding_transcript_variant
rs1000711920 -- 240,689,243(+) T/G intron_variant
rs1001837130 -- 240,685,869(+) C/T upstream_transcript_variant
rs1002184657 -- 240,685,974(+) C/T non_coding_transcript_variant
rs1002479505 -- 240,688,003(+) G/A intron_variant

Variation tolerance for LOC285191 Gene

Gene Damage Index Score: 4.07; 60.83% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for LOC285191 Gene

Disorders for LOC285191 Gene

Additional Disease Information for LOC285191

No disorders were found for LOC285191 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC285191 Gene

Publications for LOC285191 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for LOC285191 Gene

Sources for LOC285191 Gene

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