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Aliases for LOC284395 Gene
Subcategory (RNA class) for LOC284395 Gene
lncRNA
Number of RNA Genes sources:
3 / 17
Aliases for LOC284395 Gene
External Ids for LOC284395 Gene
- Entrez Gene: 284395
- Ensembl: ENSG00000264515
Previous GeneCards Identifiers for LOC284395 Gene
- GC19M030226
- GC19M034453
- GC19U900287
- GC19M034469
- GC19M034595
- GC19M029903
- GC19M029779
Summaries for LOC284395 Gene
GeneCards Summary for LOC284395 Gene
LOC284395 (Uncharacterized LOC284395) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LOC284395 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC284395 Gene
Genomics for LOC284395 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC284395 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC284395 on the GeneHancer Hub at the UCSC Golden Path
- Top Transcription factor binding sites by QIAGEN in the LOC284395 gene promoter:
-
- FOXI1
- Gfi-1
- HFH-3
- HNF-4alpha1
- HNF-4alpha2
- LCR-F1
- MyoD
- POU3F1
- RORalpha2
- SEF-1 (1)
Genomic Locations for LOC284395 Gene
Genomic Locations for LOC284395 Gene
- chr19:29,287,011-29,525,754
- (GRCh38/hg38)
- Size:
- 238,744 bases
- Orientation:
- Minus strand
- chr19:29,777,918-30,016,659
- (GRCh37/hg19)
- Size:
- 238,742 bases
- Orientation:
- Minus strand
Genomic View for LOC284395 Gene
Genes around LOC284395 on UCSC Golden Path with GeneCards custom track
LOC284395 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 19q12 by Entrez Gene
- 19q12 by Ensembl
LOC284395 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC284395 Gene
Proteins for LOC284395 Gene
Post-translational modifications for LOC284395 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC284395
- Origene Custom Protein Services for LOC284395
No data available for DME Specific Peptides for LOC284395 Gene
Domains & Families for LOC284395 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC284395 Gene
Function for LOC284395 Gene
Phenotypes From GWAS Catalog for LOC284395 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LOC284395
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LOC284395
- Browse OriGene Inhibitory RNA Products For LOC284395
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC284395 Gene
Localization for LOC284395 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC284395 Gene
Transcripts for LOC284395 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC284395 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS00008BA2B6_9606 | lncRNA | 2582 | 4 |
Ensembl: ENST00000582581 (view in UCSC) , LncBook: HSALNT0258091, LNCipedia: lnc-UQCRFS1-1:2, NONCODE: NONHSAT064098.2, |
| URS000075B7FB_9606 | lncRNA | 2582 | 1 |
RefSeq: NR_040029, |
| URS0000EF2E15_9606 | lncRNA | 2102 | 1 |
Ensembl: ENST00000660387 (view in UCSC) , |
| URS0000EF32CC_9606 | lncRNA | 1124 | 1 |
Ensembl: ENST00000664318 (view in UCSC) , |
| URS00009BD8E6_9606 | lncRNA | 2999 | 2 |
LncBook: HSALNT0258092, NONCODE: NONHSAT180295.1, |
LOC284395 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LOC284395 Gene
- 2 NCBI additional mRNA sequence :
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000577849 1127 nts (view in UCSC)
CRISPR Products
- Browse CRISPR knockouts for LOC284395
miRNA Products
Inhibitory RNA Products
- Origene shrna and RNAi products in human, mouse, rat for LOC284395
- Browse OriGene Inhibitory RNA Products For LOC284395
Clone Products
Relevant External Links for LOC284395 Gene
- GeneLoc Exon Structure for
- LOC284395
Expression for LOC284395 Gene
mRNA differential expression in normal tissues according to GTEx for LOC284395 Gene
This gene is overexpressed in Brain - Amygdala (x6.0), Brain - Cortex (x5.9), Brain - Nucleus accumbens (basal ganglia) (x5.8), Brain - Anterior cingulate cortex (BA24) (x5.4), Brain - Putamen (basal ganglia) (x4.6), Brain - Frontal Cortex (BA9) (x4.4), and Brain - Caudate (basal ganglia) (x4.0).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC284395
SOURCE GeneReport for Unigene cluster for LOC284395 Gene:
Hs.631601
Primer Products
-
OriGene qPCR primer pairs for LOC284395
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC284395 Gene
Orthologs for LOC284395 Gene
No data available for Orthologs for LOC284395 Gene
Paralogs for LOC284395 Gene
No data available for Paralogs for LOC284395 Gene
Variants for LOC284395 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Variation tolerance and Additional Variant Information for LOC284395 Gene
Disorders for LOC284395 Gene
Additional Disease Information for LOC284395
- Genetic Association Database
- (GAD)
- Human Genome Epidemiology Navigator
- (HuGE)
- Open Targets Platform
No disorders were found for LOC284395 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC284395 Gene
Publications for LOC284395 Gene
- Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose JE … Uhl GR (Molecular medicine (Cambridge, Mass.) 2010) 3 41
- Genetic variants associated with disordered eating. (PMID: 23568457) Wade TD … Martin NG (The International journal of eating disorders 2013) 3
- Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3
No data available for Mastermind for LOC284395 Gene
Products for LOC284395 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC284395
- Origene Custom Protein Services for LOC284395
- Origene shrna and RNAi products in human, mouse, rat for LOC284395
- Browse OriGene Inhibitory RNA Products For LOC284395
- OriGene qPCR primer pairs for LOC284395
- Browse CRISPR knockouts for LOC284395
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC284395
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC284395
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC284395
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC284395
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC284395
Sources for LOC284395 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB