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LOC284241 Gene(RNA Gene)

Uncharacterized LOC284241

GCID:
GC18M079638
GIFtS:
11
Genes Participants
UDN Logo

Aliases for LOC284241 Gene

Subcategory (RNA class) for LOC284241 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC284241 Gene

  • Uncharacterized LOC284241 3

External Ids for LOC284241 Gene

Previous GeneCards Identifiers for LOC284241 Gene

  • GC18M077453

Summaries for LOC284241 Gene

GeneCards Summary for LOC284241 Gene

LOC284241 (Uncharacterized LOC284241) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC284241 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC284241 Gene

Genomics for LOC284241 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for LOC284241 Gene

Promoters and enhancers for LOC284241 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH18J079677 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.1 -124 4.8 HDGF PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 CTDP1 ENSG00000178412 LOC105376875 LOC284241 ENSG00000274828 ENSG00000266901 ENSG00000265101 ENSG00000266273 ENSG00000266586 ATP9B
GH18J079642 Enhancer 1 Ensembl ENCODE 0.3 +36.1 36140 1.7 RB1 KLF14 IRF4 ZNF48 RAD21 GLIS2 ARID2 ZNF207 ZNF143 BCLAF1 NFATC1 CTDP1 PIR59230 ENSG00000178412 LOC284241 ENSG00000274828
GH18J079664 Enhancer 0.5 ENCODE 0.4 +15.0 14965 0.4 GATA3 DPF2 FOS FOXA1 ENSG00000274828 ENSG00000178412 LOC284241 PIR59230
GH18J079657 Enhancer 0.4 ENCODE 0.3 +22.3 22279 0.2 CTCF SIN3A CTDP1 HSBP1L1 LOC284241 ENSG00000274828 ENSG00000178412 PIR59230
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC284241 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC284241 Gene

Genomic Locations for LOC284241 Gene
chr18:79,641,551-79,679,775
(GRCh38/hg38)
Size:
38,225 bases
Orientation:
Minus strand

Genomic View for LOC284241 Gene

Genes around LOC284241 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC284241 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC284241 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC284241 Gene

Proteins for LOC284241 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Protein Expression for LOC284241 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for LOC284241 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC284241 Gene

Domains & Families for LOC284241 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC284241 Gene

Function for LOC284241 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for LOC284241 Gene

Phenotypes for LOC284241 Gene

GenomeRNAi human phenotypes for LOC284241:
genes like me logo Genes that share phenotypes with LOC284241: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC284241

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC284241 Gene

Localization for LOC284241 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC284241 Gene

Pathways & Interactions for LOC284241 Gene

SuperPathways for LOC284241 Gene

PathCards logo More details on SuperPathways for LOC284241
No Data Available

Interacting Proteins for LOC284241 Gene

Gene Ontology (GO) - Biological Process for LOC284241 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC284241 Gene

Drugs & Compounds for LOC284241 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC284241 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for LOC284241 Gene

(2) Selected AceView cDNA sequences:
(1) RNA Central transcripts :

CRISPR Products

Inhibitory RNA Products

  • Search GeneCopoeia for shRNA, lentivirus and/or AAV clone products for LOC284241

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC284241 Gene

No ASD Table

Relevant External Links for LOC284241 Gene

GeneLoc Exon Structure for
LOC284241

Expression for LOC284241 Gene

Products:

  1. Primer
  2. Gene Expression Assay

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC284241 Gene

mRNA expression in normal human tissues for LOC284241 Gene
mRNA expression by GTEx for LOC284241 Gene

Protein differential expression in normal tissues from HIPED for LOC284241 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for LOC284241 Gene



Protein tissue co-expression partners for LOC284241 Gene

genes like me logo Genes that share expression patterns with LOC284241: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC284241 Gene

Orthologs for LOC284241 Gene

No data available for Orthologs and Evolution for LOC284241 Gene

Paralogs for LOC284241 Gene

No data available for Paralogs for LOC284241 Gene

Variants for LOC284241 Gene

Products:

  1. SNP Genotyping and Copy Number Assay

Sequence variations from dbSNP and Humsavar for LOC284241 Gene

SNP ID Clin Chr 18 pos Variation AA Info Type
rs17855830 benign, not specified 79,680,128(-) T/G upstream_transcript_variant
rs201234471 benign, not specified 79,680,160(-) G/C upstream_transcript_variant
rs79644263 benign, not specified 79,680,133(-) G/C/T upstream_transcript_variant
rs1000010031 -- 79,639,519(-) C/T intron_variant
rs1000021346 -- 79,645,766(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC284241 Gene

Disorders for LOC284241 Gene

Additional Disease Information for LOC284241

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for LOC284241 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC284241 Gene

Publications for LOC284241 Gene

No publications were found for LOC284241 Gene.

Products for LOC284241 Gene

Sources for LOC284241 Gene

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