Free for academic non-profit institutions. Other users need a Commercial license
Aliases for LOC284240 Gene
Summaries for LOC284240 Gene
GeneCards Summary for LOC284240 Gene
LOC284240 (Uncharacterized LOC284240) is an RNA Gene, and is affiliated with the lncRNA class.
Additional gene information for LOC284240 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC284240 Gene
Genomics for LOC284240 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for LOC284240 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J079575 | Promoter/Enhancer | 1.1 | Ensembl ENCODE CraniofacialAtlas | 0.7 | -2.6 | -2625 | 2.8 | HNRNPL ZIC2 EGR1 ESR1 GABPA ZFHX2 CTCF BHLHE40 ELF1 NRF1 | ENSG00000267287 LOC284240 CTDP1 NFATC1 | |
| GH18J079587 | Enhancer | 1 | ENCODE CraniofacialAtlas | 0.4 | +9.9 | 9872 | 3.5 | GATAD2A TFE3 RXRB IRF2 MNT SOX13 CEBPB ZBTB26 NFE2 RNF2 | NFATC1 lnc-PQLC1-15 LOC284240 ENSG00000267287 piR-51878-019 CTDP1 | |
| GH18J079584 | Enhancer | 0.4 | Ensembl | 0.4 | +5.0 | 5019 | 0.2 | ZSCAN29 VEZF1 CTCF | lnc-PQLC1-15 LOC284240 ENSG00000267287 CTDP1 NFATC1 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around LOC284240 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for LOC284240 Gene
Genomic Locations for LOC284240 Gene
- chr18:79,579,282-79,589,018
- (GRCh38/hg38)
- Size:
- 9,737 bases
- Orientation:
- Plus strand
- chr18:77,336,460-77,349,010
- (GRCh37/hg19)
- Size:
- 12,551 bases
- Orientation:
- Plus strand
Genomic View for LOC284240 Gene
Genes around LOC284240 on UCSC Golden Path with GeneCards custom track
LOC284240 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
- Cytogenetic band:
-
- 18q23 by Entrez Gene
LOC284240 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for LOC284240 Gene
Proteins for LOC284240 Gene
Post-translational modifications for LOC284240 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC284240
- Origene Custom Protein Services for LOC284240
No data available for DME Specific Peptides for LOC284240 Gene
Domains & Families for LOC284240 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC284240 Gene
Function for LOC284240 Gene
Phenotypes From GWAS Catalog for LOC284240 Gene
Phenotypes for LOC284240 Gene
- GenomeRNAi human phenotypes for LOC284240:
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for LOC284240
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC284240 Gene
Localization for LOC284240 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC284240 Gene
Transcripts for LOC284240 Gene
Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC284240 Gene
| RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
|---|---|---|---|---|
| URS0000BC43C3_9606 | lncRNA | 2956 | 1 |
RefSeq: NR_148949, |
LOC284240 in the GeneCards ncRNA compendium hub on the UCSC Golden Path
Additional transcripts not in RNAcentral for LOC284240 Gene
- 2 NCBI additional mRNA sequence :
CRISPR Products
- Browse CRISPR knockouts for LOC284240
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for LOC284240 Gene
- GeneLoc Exon Structure for
- LOC284240
Expression for LOC284240 Gene
mRNA differential expression in normal tissues according to GTEx for LOC284240 Gene
This gene is overexpressed in Nerve - Tibial (x6.9).
Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC284240
Primer Products
Gene Expression Assay Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC284240 Gene
Orthologs for LOC284240 Gene
No data available for Orthologs and Evolution for LOC284240 Gene
Paralogs for LOC284240 Gene
No data available for Paralogs for LOC284240 Gene
Variants for LOC284240 Gene
SNP Genotyping and Copy Number Assay Products
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC284240 Gene
Disorders for LOC284240 Gene
No disorders were found for LOC284240 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC284240 Gene
Publications for LOC284240 Gene
No publications were found for LOC284240 Gene.
No data available for Mastermind for LOC284240 Gene
Products for LOC284240 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for LOC284240
- Origene Custom Protein Services for LOC284240
- Browse OriGene Inhibitory RNA Products For LOC284240
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for LOC284240
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For LOC284240
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for LOC284240
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for LOC284240
- Search GeneCopoeia for miRNA 3'UTR Target clone products for LOC284240
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for LOC284240
Sources for LOC284240 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB