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Aliases for LOC283387 Gene

Subcategory (RNA class) for LOC283387 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC283387 Gene

  • Uncharacterized LOC283387 3
  • AC083805.1 5

External Ids for LOC283387 Gene

Previous GeneCards Identifiers for LOC283387 Gene

  • GC12M058406
  • GC12M057981
  • GC12U900213

Summaries for LOC283387 Gene

GeneCards Summary for LOC283387 Gene

LOC283387 (Uncharacterized LOC283387) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC283387 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC283387 Gene

Genomics for LOC283387 Gene

GeneHancer (GH) Regulatory Elements for LOC283387 Gene

Promoters and enhancers for LOC283387 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I057109 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 74.5 +785.2 785228 3.8 CLOCK FEZF1 DMAP1 IRF4 YY1 ZNF213 ZNF416 ZNF143 ZNF548 MCM3 STAT6 NEMP1 EEF1AKMT3 ENSG00000257740 BAZ2A PAN2 SMARCC2 ANKRD52 CDK4 CTDSP2
GH12I057245 Enhancer 1.1 ENCODE dbSUPER 39 +651.2 651249 0.2 PKNOX1 ZNF2 ZNF213 ATF7 ZNF214 KLF13 YY2 ZNF662 REST ZNF491 ENSG00000257740 LOC283387 DTX3 PAN2 ANKRD52 HSPD1P4 NAB2 NEMP1 EEF1AKMT3 ENSG00000224713
GH12I057590 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 21.3 +305.1 305061 1.9 HDGF SMAD1 FOXA2 ARID4B SIN3A ZNF2 YY1 ZNF766 E2F8 ZNF207 PIP4K2C ENSG00000224713 NEMP1 SLC26A10 LOC283387 TSPAN31 TSFM EEF1AKMT3 ARHGEF25 CDK4
GH12I057750 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 19.5 +142.6 142624 6.4 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 SLC30A9 E2F8 ZNF143 ZNF548 CDK4 MARCH9 NEMP1 TSFM CTDSP2 EEF1AKMT3 MBD6 ENSG00000224713 LOC283387 TSPAN31
GH12I057733 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE 11.2 +158.0 158026 9.6 HDGF ARID4B SIN3A ZNF213 E2F8 ZNF143 ZNF548 KLF13 SP3 REST AGAP2 TSPAN31 TSFM NEMP1 ARHGAP9 ATP23 CTDSP2 EEF1AKMT3 ENSG00000224713 CDK4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC283387 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC283387 Gene

Genomic Locations for LOC283387 Gene
chr12:57,869,173-57,896,482
(GRCh38/hg38)
Size:
27,310 bases
Orientation:
Minus strand
chr12:58,263,618-58,290,265
(GRCh37/hg19)

Genomic View for LOC283387 Gene

Genes around LOC283387 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC283387 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC283387 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC283387 Gene

Proteins for LOC283387 Gene

Post-translational modifications for LOC283387 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC283387 Gene

Domains & Families for LOC283387 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC283387 Gene

Function for LOC283387 Gene

Phenotypes From GWAS Catalog for LOC283387 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC283387 Gene

Localization for LOC283387 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC283387 Gene

Pathways & Interactions for LOC283387 Gene

SuperPathways for LOC283387 Gene

No Data Available

Interacting Proteins for LOC283387 Gene

Gene Ontology (GO) - Biological Process for LOC283387 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC283387 Gene

Drugs & Compounds for LOC283387 Gene

No Compound Related Data Available

Transcripts for LOC283387 Gene

mRNA/cDNA for LOC283387 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC283387 Gene

No ASD Table

Relevant External Links for LOC283387 Gene

GeneLoc Exon Structure for
LOC283387

Expression for LOC283387 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC283387 Gene

SOURCE GeneReport for Unigene cluster for LOC283387 Gene:

Hs.727244
genes like me logo Genes that share expression patterns with LOC283387: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC283387 Gene

Orthologs for LOC283387 Gene

Evolution for LOC283387 Gene

ENSEMBL:
Gene Tree for LOC283387 (if available)
TreeFam:
Gene Tree for LOC283387 (if available)

No data available for Orthologs for LOC283387 Gene

Paralogs for LOC283387 Gene

No data available for Paralogs for LOC283387 Gene

Variants for LOC283387 Gene

Sequence variations from dbSNP and Humsavar for LOC283387 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000029082 -- 57,892,419(-) G/A intron_variant
rs1000037792 -- 57,878,760(-) C/A intron_variant
rs1000102825 -- 57,877,353(-) A/C intron_variant
rs1000260528 -- 57,872,448(-) A/G/T intron_variant
rs1000350518 -- 57,881,734(-) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC283387 Gene

Disorders for LOC283387 Gene

Additional Disease Information for LOC283387

No disorders were found for LOC283387 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC283387 Gene

Publications for LOC283387 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LOC283387 Gene

Sources for LOC283387 Gene

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