LOC196469 Gene (Pseudogene)

DNA DC->DU-Editing Enzyme APOBEC-3G-Like

GC12M108281
GIFtS:
4
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Aliases for LOC196469 Gene

Aliases for LOC196469 Gene

  • DNA DC->DU-Editing Enzyme APOBEC-3G-Like 3

External Ids for LOC196469 Gene

Previous GeneCards Identifiers for LOC196469 Gene

  • GC12M107780
  • GC12M108555
  • GC12M107177
  • GC12M108675

Summaries for LOC196469 Gene

GeneCards Summary for LOC196469 Gene

LOC196469 (DNA DC->DU-Editing Enzyme APOBEC-3G-Like) is a Pseudogene.

Additional gene information for LOC196469 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC196469 Gene

Genomics for LOC196469 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC196469 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J108282 Promoter/Enhancer 0.7 Ensembl ENCODE dbSUPER 600.7 -0.6 -619 0.6 ENSG00000257281 LOC196469 CMKLR1 FICD LINC01498 lnc-SART3-2 lnc-CMKLR1-2 WSCD2
GH12J108288 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -7.3 -7269 1.2 EZH2 NR2F2 ATF4 lnc-SART3-2 CMKLR1 FICD LINC01498 LOC196469 lnc-CMKLR1-2 WSCD2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC196469 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC196469 Gene

Genomic Locations for LOC196469 Gene
chr12:108,280,950-108,282,282
(GRCh38/hg38)
Size:
1,333 bases
Orientation:
Minus strand
chr12:108,674,880-108,676,012
(GRCh37/hg19)
Size:
1,133 bases
Orientation:
Minus strand

Genomic View for LOC196469 Gene

Genes around LOC196469 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC196469 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC196469 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC196469 Gene

Proteins for LOC196469 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC196469 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC196469 Gene

Domains & Families for LOC196469 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC196469 Gene

Function for LOC196469 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC196469 Gene

Localization for LOC196469 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC196469 Gene

Pathways & Interactions for LOC196469 Gene

PathCards logo

SuperPathways for LOC196469 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC196469 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC196469 Gene

Drugs & Compounds for LOC196469 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC196469 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

Alternative Splicing Database (ASD) splice patterns (SP) for LOC196469 Gene

No ASD Table

Relevant External Links for LOC196469 Gene

GeneLoc Exon Structure for
LOC196469

No data available for mRNA/cDNA for LOC196469 Gene

Expression for LOC196469 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC196469 Gene

mRNA expression in normal human tissues for LOC196469 Gene
mRNA expression by BioGPS for LOC196469 GenemRNA expression by GTEx for LOC196469 Gene

mRNA differential expression in normal tissues according to GTEx for LOC196469 Gene

This gene is overexpressed in Brain - Cerebellum (x6.5), Artery - Aorta (x5.2), Artery - Tibial (x4.5), and Brain - Cerebellar Hemisphere (x4.4).
genes like me logo Genes that share expression patterns with LOC196469: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC196469 Gene

Orthologs for LOC196469 Gene

No data available for Orthologs and Evolution for LOC196469 Gene

Paralogs for LOC196469 Gene

No data available for Paralogs for LOC196469 Gene

Variants for LOC196469 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC196469 Gene

Disorders for LOC196469 Gene

No disorders were found for LOC196469 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC196469 Gene

Publications for LOC196469 Gene

No publications were found for LOC196469 Gene.

No data available for Mastermind for LOC196469 Gene

Products for LOC196469 Gene

Sources for LOC196469 Gene