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Aliases for LOC151484 Gene

Subcategory (RNA class) for LOC151484 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC151484 Gene

  • Uncharacterized LOC151484 3
  • AC012507.2 5

External Ids for LOC151484 Gene

Previous GeneCards Identifiers for LOC151484 Gene

  • GC02P229811
  • GC02P230483
  • GC02P231715
  • GC02U900513
  • GC02P231953
  • GC02P231754

Summaries for LOC151484 Gene

GeneCards Summary for LOC151484 Gene

LOC151484 (Uncharacterized LOC151484) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC151484 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC151484 Gene

Genomics for LOC151484 Gene

GeneHancer (GH) Regulatory Elements for LOC151484 Gene

Promoters and enhancers for LOC151484 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J230885 Enhancer 0.8 ENCODE dbSUPER 650.7 -0.3 -348 0.8 MXI1 RFX1 POLR2A ZNF10 MYNN MNT BMI1 ZNF507 LOC151484 ITM2C
GH02J230924 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 11.9 +38.9 38903 2.5 HDGF PKNOX1 SMAD1 STAT5A BMI1 BATF IRF4 RAD21 GLIS2 ZNF207 GPR55 ENSG00000283164 SPATA3 SPATA3-AS1 LOC151484 PSMD1 GC02M230912
GH02J230847 Enhancer 1.1 Ensembl ENCODE 12.3 -38.4 -38382 0.6 ARID4B DMAP1 IRF4 ZNF48 ZNF143 FOS RUNX3 NFKBIZ RXRA JUNB LOC151484 SPATA3-AS1 SPATA3 ENSG00000230385 PSMD1 C2orf72 ENSG00000270891 ITM2C
GH02J230850 Enhancer 0.7 ENCODE 11.6 -36.3 -36279 0.2 MEIS2 CTCF AHR PKNOX1 SIN3A ZNF48 RAD21 CTBP1 EGR1 ZNF143 LOC151484 ENSG00000230385 SPATA3-AS1 SPATA3 PSMD1 C2orf72 ENSG00000270891 ITM2C
GH02J230913 Enhancer 0.6 ENCODE 12 +27.1 27121 0.2 SMARCA5 CTCF CEBPB TRIM22 REST ELF1 RAD21 ZNF143 RUNX3 LOC151484 SPATA3 SPATA3-AS1 ENSG00000230385 ENSG00000283164 GC02M230912 GPR55
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC151484 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC151484 Gene

Genomic Locations for LOC151484 Gene
chr2:230,886,500-230,904,517
(GRCh38/hg38)
Size:
18,018 bases
Orientation:
Plus strand

Genomic View for LOC151484 Gene

Genes around LOC151484 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC151484 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC151484 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC151484 Gene

Proteins for LOC151484 Gene

Post-translational modifications for LOC151484 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC151484 Gene

Domains & Families for LOC151484 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC151484 Gene

Function for LOC151484 Gene

genes like me logo Genes that share phenotypes with LOC151484: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC151484 Gene

Localization for LOC151484 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC151484 Gene

Pathways & Interactions for LOC151484 Gene

SuperPathways for LOC151484 Gene

No Data Available

Interacting Proteins for LOC151484 Gene

Gene Ontology (GO) - Biological Process for LOC151484 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC151484 Gene

Drugs & Compounds for LOC151484 Gene

No Compound Related Data Available

Transcripts for LOC151484 Gene

mRNA/cDNA for LOC151484 Gene

(2) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(5) RNA Central transcripts :

Unigene Clusters for LOC151484 Gene

Uncharacterized LOC151484:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for LOC151484 Gene

No ASD Table

Relevant External Links for LOC151484 Gene

GeneLoc Exon Structure for
LOC151484

Expression for LOC151484 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC151484 Gene

SOURCE GeneReport for Unigene cluster for LOC151484 Gene:

Hs.559309
genes like me logo Genes that share expression patterns with LOC151484: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC151484 Gene

Orthologs for LOC151484 Gene

Evolution for LOC151484 Gene

ENSEMBL:
Gene Tree for LOC151484 (if available)
TreeFam:
Gene Tree for LOC151484 (if available)

No data available for Orthologs for LOC151484 Gene

Paralogs for LOC151484 Gene

No data available for Paralogs for LOC151484 Gene

Variants for LOC151484 Gene

Sequence variations from dbSNP and Humsavar for LOC151484 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000136267 -- 230,904,290(+) T/C intron_variant
rs1000188251 -- 230,904,108(+) A/T intron_variant
rs1000374855 -- 230,902,452(+) C/T intron_variant
rs1000512850 -- 230,903,617(+) A/C intron_variant
rs1000833644 -- 230,895,250(+) T/G intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC151484 Gene

Variant ID Type Subtype PubMed ID
esv3594616 CNV loss 21293372
nsv470522 CNV loss 18288195
nsv834565 CNV gain 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC151484 Gene

Disorders for LOC151484 Gene

Additional Disease Information for LOC151484

No disorders were found for LOC151484 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC151484 Gene

Publications for LOC151484 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for LOC151484 Gene

Sources for LOC151484 Gene

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