Aliases for LOC150051 Gene

Aliases for LOC150051 Gene

  • Uncharacterized LOC150051 3 5
  • Uncharacterized Protein LOC150051 3
  • NONHSAG032643 92
  • AP000251.1 5
  • Lnc-SOD1-3 168

External Ids for LOC150051 Gene

Previous GeneCards Identifiers for LOC150051 Gene

  • GC21P029509
  • GC21P031852
  • GC21P031853
  • GC21U900230
  • GC21P032930

Summaries for LOC150051 Gene

GeneCards Summary for LOC150051 Gene

LOC150051 (Uncharacterized LOC150051) is a Protein Coding gene.

Additional gene information for LOC150051 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC150051 Gene

Genomics for LOC150051 Gene

GeneHancer (GH) Regulatory Elements for LOC150051 Gene

Promoters and enhancers for LOC150051 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J031559 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas 507.7 -0.2 -171 3.9 EP300 ZSCAN5C ZNF300 USF1 SP1 ZFX CTCF ZNF639 ZNF10 ZIC2 TIAM1 LOC150051 MIS18A MIS18A-AS1 EVA1C ENSG00000273091 SCAF4 RF00017-3684
GH21J031529 Enhancer 1 Ensembl ENCODE 16.3 -28.2 -28240 3.2 ZSCAN5C ZIC2 ZNF423 RFX1 KLF7 CTBP1 ZNF341 OSR2 SIN3A WT1 TIAM1 LOC150051 piR-41306-166 ENSG00000237325
GH21J031180 Promoter/Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 10.5 -375.2 -375184 7.5 ZBTB40 CTCF RAD21 SMC3 USF1 ZNF654 PRDM4 ZNF677 ZNF384 GATA2 LOC150051 TIAM1 RF00017-3683 piR-48820-061
GH21J031395 Enhancer 1.2 Ensembl ENCODE CraniofacialAtlas 11.2 -161.8 -161840 8 ZNF300 RBAK ZNF10 TRIM28 ZNF662 ATF2 ZNF341 OSR2 ZNF491 ZNF266 SCAF4 MIS18A-AS1 ENSG00000238390 URB1 MIS18A FBXW11P1 TIAM1 LOC150051 ENSG00000273091 HUNK
GH21J031157 Promoter/Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 10.1 -399.5 -399497 4.5 USF1 TEAD4 SAP30 MXI1 GATA3 KDM1A HLF CHD2 GATA2 NANOG LOC150051 TIAM1 RF00017-3683 piR-48820-061
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC150051 on UCSC Golden Path with GeneCards custom track

Cistromic (ChIP-Seq) regulation report from SPP (The Signaling Pathways Project) for LOC150051

Top Transcription factor binding sites by QIAGEN in the LOC150051 gene promoter:
  • Elk-1
  • GATA-1
  • GATA-2
  • GATA-3
  • HOXA5
  • Lhx3a
  • LHX3b
  • MyoD
  • SRF
  • SRF (504 AA)

Genomic Locations for LOC150051 Gene

Genomic Locations for LOC150051 Gene
chr21:31,559,241-31,560,487
(GRCh38/hg38)
Size:
1,247 bases
Orientation:
Plus strand
chr21:32,931,558-32,932,800
(GRCh37/hg19)
Size:
1,243 bases
Orientation:
Plus strand

Genomic View for LOC150051 Gene

Genes around LOC150051 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC150051 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC150051 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC150051 Gene

Proteins for LOC150051 Gene

Post-translational modifications for LOC150051 Gene

No Post-translational modifications

Other Protein References for LOC150051 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC150051 Gene

Domains & Families for LOC150051 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC150051 Gene

Function for LOC150051 Gene

Phenotypes From GWAS Catalog for LOC150051 Gene

Phenotypes for LOC150051 Gene

genes like me logo Genes that share phenotypes with LOC150051: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC150051 Gene

Localization for LOC150051 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC150051 Gene

Pathways & Interactions for LOC150051 Gene

PathCards logo

SuperPathways for LOC150051 Gene

No Data Available

Interacting Proteins for LOC150051 Gene

;

Gene Ontology (GO) - Biological Process for LOC150051 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC150051 Gene

Drugs & Compounds for LOC150051 Gene

No Compound Related Data Available

Transcripts for LOC150051 Gene

mRNA/cDNA for LOC150051 Gene

1 REFSEQ mRNAs :
2 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
6 RNACentral transcripts :
2 NONCODE transcripts :
5 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC150051 Gene

No ASD Table

Relevant External Links for LOC150051 Gene

GeneLoc Exon Structure for
LOC150051

Expression for LOC150051 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC150051 Gene

mRNA differential expression in normal tissues according to GTEx for LOC150051 Gene

This gene is overexpressed in Testis (x5.4) and Esophagus - Mucosa (x4.1).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for LOC150051

SOURCE GeneReport for Unigene cluster for LOC150051 Gene:

Hs.708976
genes like me logo Genes that share expression patterns with LOC150051: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC150051 Gene

Orthologs for LOC150051 Gene

Evolution for LOC150051 Gene

ENSEMBL:
Gene Tree for LOC150051 (if available)
TreeFam:
Gene Tree for LOC150051 (if available)

No data available for Orthologs for LOC150051 Gene

Paralogs for LOC150051 Gene

No data available for Paralogs for LOC150051 Gene

Variants for LOC150051 Gene

Additional dbSNP identifiers (rs#s) for LOC150051 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC150051 Gene

Disorders for LOC150051 Gene

No disorders were found for LOC150051 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC150051 Gene

Publications for LOC150051 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 54

No data available for Mastermind for LOC150051 Gene

Products for LOC150051 Gene

Sources for LOC150051 Gene