Aliases for LOC149684 Gene

Subcategory (RNA class) for LOC149684 Gene

lncRNA

Quality Score for this RNA gene is

11

Aliases for LOC149684 Gene

  • Uncharacterized LOC149684 3

External Ids for LOC149684 Gene

Previous GeneCards Identifiers for LOC149684 Gene

  • GC20P036617
  • GC20P037527
  • GC20U900151

Summaries for LOC149684 Gene

GeneCards Summary for LOC149684 Gene

LOC149684 (Uncharacterized LOC149684) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC149684 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC149684 Gene

Genomics for LOC149684 Gene

GeneHancer (GH) Regulatory Elements for LOC149684 Gene


GeneHancers around LOC149684 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC149684 Gene

Genomic Locations for LOC149684 Gene
chr20:38,260,175-38,288,947
(GRCh38/hg38)
Size:
28,773 bases
Orientation:
Plus strand

Genomic View for LOC149684 Gene

Genes around LOC149684 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC149684 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC149684 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC149684 Gene

Proteins for LOC149684 Gene

Post-translational modifications for LOC149684 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC149684 Gene

Domains & Families for LOC149684 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC149684 Gene

Function for LOC149684 Gene

Phenotypes From GWAS Catalog for LOC149684 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC149684 Gene

Localization for LOC149684 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC149684 Gene

Pathways & Interactions for LOC149684 Gene

PathCards logo

SuperPathways for LOC149684 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC149684 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC149684 Gene

Drugs & Compounds for LOC149684 Gene

No Compound Related Data Available

Transcripts for LOC149684 Gene

mRNA/cDNA for LOC149684 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(1) RNACentral transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC149684 Gene

No ASD Table

Relevant External Links for LOC149684 Gene

GeneLoc Exon Structure for
LOC149684

Expression for LOC149684 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC149684 Gene

mRNA expression in normal human tissues for LOC149684 Gene

SOURCE GeneReport for Unigene cluster for LOC149684 Gene:

Hs.628250
genes like me logo Genes that share expression patterns with LOC149684: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC149684 Gene

Orthologs for LOC149684 Gene

No data available for Orthologs and Evolution for LOC149684 Gene

Paralogs for LOC149684 Gene

No data available for Paralogs for LOC149684 Gene

Variants for LOC149684 Gene

Sequence variations from dbSNP and Humsavar for LOC149684 Gene

SNP ID Clin Chr 20 pos Variation AA Info Type
rs1000037098 -- 38,258,839(+) C/G upstream_transcript_variant
rs1000084661 -- 38,288,478(+) T/G intron_variant
rs1000151853 -- 38,278,623(+) C/T intron_variant
rs1000275817 -- 38,270,258(+) T/A/C/G intron_variant
rs1000306257 -- 38,276,804(+) GGGTAACA/ intron_variant

Structural Variations from Database of Genomic Variants (DGV) for LOC149684 Gene

Variant ID Type Subtype PubMed ID
dgv4309n100 CNV loss 25217958
esv3645775 CNV loss 21293372
esv3645776 CNV loss 21293372
esv3645777 CNV loss 21293372
nsv1058457 CNV loss 25217958
nsv475769 CNV novel sequence insertion 20440878
nsv585964 CNV loss 21841781

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for LOC149684 Gene

Disorders for LOC149684 Gene

No disorders were found for LOC149684 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC149684 Gene

Publications for LOC149684 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 56

No data available for External Links for LOC149684 Gene

Products for LOC149684 Gene

Sources for LOC149684 Gene