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Aliases for LOC148430 Gene

Aliases for LOC148430 Gene

  • Ribosomal Protein S2 Pseudogene 3

External Ids for LOC148430 Gene

Previous GeneCards Identifiers for LOC148430 Gene

  • GC01P159087
  • GC01P157108
  • GC01P158153
  • GC01P158592
  • GC01P158189
  • GC01P159642
  • GC01P161376

Summaries for LOC148430 Gene

GeneCards Summary for LOC148430 Gene

LOC148430 (Ribosomal Protein S2 Pseudogene) is a Pseudogene.

Additional gene information for LOC148430 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC148430 Gene

Genomics for LOC148430 Gene

GeneHancer (GH) Regulatory Elements for LOC148430 Gene

Promoters and enhancers for LOC148430 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J161407 Enhancer 0.4 dbSUPER 550.7 +1.7 1723 0.7 PKNOX1 MGA ZNF592 ENSG00000215840 LOC148430 HSPA7 ENSG00000277882 ENSG00000283696 ENSG00000283360
GH01J161406 Enhancer 0.3 dbSUPER 550.7 +0.4 366 0.5 ZNF24 ENSG00000215840 GC01M161414 LOC148430 PIR42835 PIR42841 PIR38449 ENSG00000277882 ENSG00000283696 ENSG00000283360
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC148430 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the LOC148430 gene promoter:
  • c-Myc
  • HEN1
  • Max
  • Meis-1
  • Meis-1a
  • Meis-1b
  • Nkx2-5
  • Olf-1
  • XBP-1

Genomic Locations for LOC148430 Gene

Genomic Locations for LOC148430 Gene
chr1:161,406,045-161,407,121
(GRCh38/hg38)
Size:
1,077 bases
Orientation:
Plus strand
chr1:161,375,835-161,376,911
(GRCh37/hg19)
Size:
1,077 bases
Orientation:
Plus strand

Genomic View for LOC148430 Gene

Genes around LOC148430 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC148430 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC148430 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC148430 Gene

Proteins for LOC148430 Gene

Post-translational modifications for LOC148430 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC148430 Gene

Domains & Families for LOC148430 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC148430 Gene

Function for LOC148430 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC148430 Gene

Localization for LOC148430 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC148430 Gene

Pathways & Interactions for LOC148430 Gene

SuperPathways for LOC148430 Gene

No Data Available

Interacting Proteins for LOC148430 Gene

Gene Ontology (GO) - Biological Process for LOC148430 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC148430 Gene

Drugs & Compounds for LOC148430 Gene

No Compound Related Data Available

Transcripts for LOC148430 Gene

mRNA/cDNA for LOC148430 Gene

(2) Selected AceView cDNA sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for LOC148430 Gene

No ASD Table

Relevant External Links for LOC148430 Gene

GeneLoc Exon Structure for
LOC148430

Expression for LOC148430 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC148430 Gene

mRNA differential expression in normal tissues according to GTEx for LOC148430 Gene

This gene is overexpressed in Testis (x4.7).
genes like me logo Genes that share expression patterns with LOC148430: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC148430 Gene

Orthologs for LOC148430 Gene

This gene was present in the common ancestor of animals.

Orthologs for LOC148430 Gene

Organism Taxonomy Gene Similarity Type Details
fruit fly
(Drosophila melanogaster)
Insecta sop 36
  • 79 (a)
worm
(Caenorhabditis elegans)
Secernentea rps-2 36
  • 75 (a)
Species where no ortholog for LOC148430 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • zebrafish (Danio rerio)

No data available for Evolution for LOC148430 Gene

Paralogs for LOC148430 Gene

No data available for Paralogs for LOC148430 Gene

Variants for LOC148430 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC148430 Gene

Disorders for LOC148430 Gene

No disorders were found for LOC148430 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC148430 Gene

Publications for LOC148430 Gene

No publications were found for LOC148430 Gene.

Products for LOC148430 Gene

Sources for LOC148430 Gene

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