Aliases for LOC126860 Gene

Aliases for LOC126860 Gene

  • ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 1 Pseudogene 3

External Ids for LOC126860 Gene

Previous GeneCards Identifiers for LOC126860 Gene

  • GC01P177080
  • GC01P174984
  • GC01P176076
  • GC01P176792
  • GC01P176287
  • GC01P177824
  • GC01P179556

Summaries for LOC126860 Gene

GeneCards Summary for LOC126860 Gene

LOC126860 (ArfGAP With GTPase Domain, Ankyrin Repeat And PH Domain 1 Pseudogene) is a Pseudogene.

Additional gene information for LOC126860 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC126860 Gene

Genomics for LOC126860 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC126860 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J179586 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas 600.7 -0.2 -180 1 CTCF ZNF692 TARDBP FOXA1 ZIC2 PATZ1 EZH2 ZFX ZBTB20 MTA3 ENSG00000227141 LOC126860 piR-36277 piR-30907 piR-36656 piR-36681 piR-38618 piR-33898 piR-34124 piR-31766
GH01J179583 Enhancer 0.2 Ensembl 0.7 -2.5 -2504 1.6 piR-51287 AXDND1 TDRD5 ABL2 LOC126860 NPHS2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC126860 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC126860 Gene

Genomic Locations for LOC126860 Gene
chr1:179,586,505-179,587,674
(GRCh38/hg38)
Size:
1,170 bases
Orientation:
Plus strand
chr1:179,555,840-179,558,310
(GRCh37/hg19)
Size:
2,471 bases
Orientation:
Plus strand

Genomic View for LOC126860 Gene

Genes around LOC126860 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC126860 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC126860 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC126860 Gene

Proteins for LOC126860 Gene

Post-translational modifications for LOC126860 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC126860 Gene

Domains & Families for LOC126860 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC126860 Gene

Function for LOC126860 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC126860 Gene

Localization for LOC126860 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC126860 Gene

Pathways & Interactions for LOC126860 Gene

PathCards logo

SuperPathways for LOC126860 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC126860 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC126860 Gene

Drugs & Compounds for LOC126860 Gene

No Compound Related Data Available

Transcripts for LOC126860 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC126860 Gene

No ASD Table

Relevant External Links for LOC126860 Gene

GeneLoc Exon Structure for
LOC126860

No data available for mRNA/cDNA for LOC126860 Gene

Expression for LOC126860 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC126860 Gene

mRNA differential expression in normal tissues according to GTEx for LOC126860 Gene

This gene is overexpressed in Testis (x20.3).
genes like me logo Genes that share expression patterns with LOC126860: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC126860 Gene

Orthologs for LOC126860 Gene

No data available for Orthologs and Evolution for LOC126860 Gene

Paralogs for LOC126860 Gene

No data available for Paralogs for LOC126860 Gene

Variants for LOC126860 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC126860 Gene

Disorders for LOC126860 Gene

No disorders were found for LOC126860 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC126860 Gene

Publications for LOC126860 Gene

No publications were found for LOC126860 Gene.

No data available for Mastermind for LOC126860 Gene

Products for LOC126860 Gene

Sources for LOC126860 Gene