Aliases for LOC124865 Gene

Aliases for LOC124865 Gene

  • MRT4 Homolog, Ribosome Maturation Factor Pseudogene 3
  • MRNA Turnover 4 Homolog (S. Cerevisiae) (MRTO4) Pseudogene 5
  • MRNA Turnover 4 Homolog (S. Cerevisiae) Pseudogene 3
  • AC027801.2 5

External Ids for LOC124865 Gene

Previous GeneCards Identifiers for LOC124865 Gene

  • GC17P047727
  • GC17P050496
  • GC17P048358
  • GC17P048491
  • GC17P045371
  • GC17P048016

Summaries for LOC124865 Gene

GeneCards Summary for LOC124865 Gene

LOC124865 (MRT4 Homolog, Ribosome Maturation Factor Pseudogene) is a Pseudogene.

Additional gene information for LOC124865 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC124865 Gene

Genomics for LOC124865 Gene

GeneHancer (GH) Regulatory Elements for LOC124865 Gene

Promoters and enhancers for LOC124865 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J049939 Enhancer 0.9 Ensembl ENCODE 500.7 +0.8 779 1.8 ZIC2 RUNX1 CEBPB SAP130 SPI1 ZNF398 HNF4A KDM1A TFAP4 NR2F6 LOC124865 DLX4 RNU6-1313P DLX3 ENSG00000248172 HSALNG0117228
GH17J049912 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.4 -24.3 -24292 4.3 TEAD4 ZIC2 ZNF316 ZNF263 MBD2 FOSL2 POLR2A NFE2 ZFHX2 BCOR ENSG00000254039 DLX3 ENSG00000248172 FLJ45513 LOC124865
GH17J049929 Enhancer 0.8 Ensembl ENCODE 0.4 -10.5 -10521 1.6 CREB1 JUN GABPB1 FOSL2 RAD21 SMAD5 GLIS1 ZNF398 ATF2 TEAD3 ENSG00000254039 LOC124865
GH17J049944 Enhancer 0.6 Ensembl CraniofacialAtlas 0.4 +5.5 5479 0.8 NRF1 ZFHX2 TAF15 EZH2 EGR1 EGR2 TAC4 HSALNG0117228 LOC124865
GH17J049926 Enhancer 0.6 Ensembl 0.4 -12.0 -12021 1 REST MIER1 ZNF282 FOSL1 EHMT2 NR2F1 EGR1 NFE2 VEZF1 ETV1 ENSG00000254039 LOC124865
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC124865 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC124865 Gene

Genomic Locations for LOC124865 Gene
chr17:49,939,122-49,939,821
(GRCh38/hg38)
Size:
700 bases
Orientation:
Plus strand
chr17:48,016,486-48,017,185
(GRCh37/hg19)
Size:
700 bases
Orientation:
Plus strand

Genomic View for LOC124865 Gene

Genes around LOC124865 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC124865 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC124865 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC124865 Gene

Proteins for LOC124865 Gene

Post-translational modifications for LOC124865 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC124865 Gene

Domains & Families for LOC124865 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC124865 Gene

Function for LOC124865 Gene

Phenotypes From GWAS Catalog for LOC124865 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC124865 Gene

Localization for LOC124865 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC124865 Gene

Pathways & Interactions for LOC124865 Gene

PathCards logo

SuperPathways for LOC124865 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC124865 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC124865 Gene

Drugs & Compounds for LOC124865 Gene

No Compound Related Data Available

Transcripts for LOC124865 Gene

mRNA/cDNA for LOC124865 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC124865 Gene

No ASD Table

Relevant External Links for LOC124865 Gene

GeneLoc Exon Structure for
LOC124865

Expression for LOC124865 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for LOC124865 Gene

mRNA differential expression in normal tissues according to GTEx for LOC124865 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x7.6), Testis (x6.4), and Skin - Not Sun Exposed (Suprapubic) (x4.9).
genes like me logo Genes that share expression patterns with LOC124865: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC124865 Gene

Orthologs for LOC124865 Gene

Evolution for LOC124865 Gene

ENSEMBL:
Gene Tree for LOC124865 (if available)
TreeFam:
Gene Tree for LOC124865 (if available)

No data available for Orthologs for LOC124865 Gene

Paralogs for LOC124865 Gene

No data available for Paralogs for LOC124865 Gene

Variants for LOC124865 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC124865 Gene

Disorders for LOC124865 Gene

No disorders were found for LOC124865 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC124865 Gene

Publications for LOC124865 Gene

No publications were found for LOC124865 Gene.

No data available for Mastermind for LOC124865 Gene

Products for LOC124865 Gene

Sources for LOC124865 Gene