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Aliases for LOC113939962 Gene

Aliases for LOC113939962 Gene

  • Sharpr-MPRA Regulatory Region 625 3

External Ids for LOC113939962 Gene

Summaries for LOC113939962 Gene

Entrez Gene Summary for LOC113939962 Gene

  • This genomic sequence was predicted to be a transcriptional regulatory region based on chromatin state analysis from the ENCODE (ENCyclopedia Of DNA Elements) project. It was validated as a functional repressive element by the Sharpr-MPRA technique (Systematic high-resolution activation and repression profiling with reporter tiling using massively parallel reporter assays) in K562 erythroleukemia cells (group: K562 Repressive non-DNase unmatched - State 5:Enh, candidate strong enhancer, open chromatin), with weaker repression in HepG2 liver carcinoma cells (group: HepG2 Repressive non-DNase unmatched - State 1:Tss, active promoter, TSS/CpG island region). [provided by RefSeq, Jan 2019]

GeneCards Summary for LOC113939962 Gene

LOC113939962 (Sharpr-MPRA Regulatory Region 625) is a Biological Region gene.

Additional gene information for LOC113939962 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC113939962 Gene

Genomics for LOC113939962 Gene

Genomic Locations for LOC113939962 Gene

Genomic Locations for LOC113939962 Gene
chr17:-
(GRCh38/hg38)
Orientation:
Unknown strand

Genomic View for LOC113939962 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

No data available for GeneHancer (GH) Regulatory Elements and RefSeq DNA sequence for LOC113939962 Gene

Proteins for LOC113939962 Gene

Post-translational modifications for LOC113939962 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC113939962 Gene

Domains & Families for LOC113939962 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC113939962 Gene

Function for LOC113939962 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC113939962 Gene

Localization for LOC113939962 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC113939962 Gene

Pathways & Interactions for LOC113939962 Gene

PathCards logo

SuperPathways for LOC113939962 Gene

No Data Available

Interacting Proteins for LOC113939962 Gene

Gene Ontology (GO) - Biological Process for LOC113939962 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC113939962 Gene

Drugs & Compounds for LOC113939962 Gene

No Compound Related Data Available

Transcripts for LOC113939962 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC113939962 Gene

No ASD Table

No data available for mRNA/cDNA for LOC113939962 Gene

Expression for LOC113939962 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC113939962 Gene

Orthologs for LOC113939962 Gene

No data available for Orthologs and Evolution for LOC113939962 Gene

Paralogs for LOC113939962 Gene

No data available for Paralogs for LOC113939962 Gene

Variants for LOC113939962 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC113939962 Gene

Disorders for LOC113939962 Gene

No disorders were found for LOC113939962 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC113939962 Gene

Publications for LOC113939962 Gene

  1. Genome-scale high-resolution mapping of activating and repressive nucleotides in regulatory regions. (PMID: 27701403) Ernst J … Kellis M (Nature biotechnology 2016) 3 58

No data available for External Links for LOC113939962 Gene

Products for LOC113939962 Gene

Sources for LOC113939962 Gene

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