Aliases for LOC112268408 Gene

Subcategory (RNA class) for LOC112268408 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC112268408 Gene

  • Uncharacterized LOC112268408 3 5
  • Lnc-SLC14A1-6 168
  • HSALNG0121266 167
  • NONHSAG023770 92
  • AC021517.1 5

External Ids for LOC112268408 Gene

Additional External Ids for LOC112268408 Gene

Previous GeneCards Identifiers for LOC112268408 Gene

  • GC18U901300

Summaries for LOC112268408 Gene

GeneCards Summary for LOC112268408 Gene

LOC112268408 (Uncharacterized LOC112268408) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC112268408 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC112268408 Gene

Genomics for LOC112268408 Gene

GeneHancer (GH) Regulatory Elements for LOC112268408 Gene

Promoters and enhancers for LOC112268408 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J045482 Enhancer 0.2 Ensembl 500.7 -0.7 -743 0.4 LOC112268408 SLC14A2-AS1 lnc-EPG5-6 SLC14A2
GH18J045449 Enhancer 0.6 Ensembl ENCODE 7.9 -33.3 -33343 2.8 MXI1 POLR2A SMARCA4 CHD2 GATA2 EZH2 LOC112268408 lnc-EPG5-6 SLC14A2-AS1 SLC14A2
GH18J045456 Enhancer 0.5 Ensembl ENCODE 8.1 -26.6 -26642 1.4 SPI1 CTCF LOC112268408 lnc-EPG5-6 SLC14A2-AS1 SLC14A2
GH18J045401 Enhancer 0.6 Ensembl ENCODE 4.5 -80.5 -80513 2 FOS JUND ATF2 ZNF133 ZNF24 STAT3 LOC112268408 RF00994-442 piR-50444-201 SLC14A2
GH18J045516 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 0.3 +34.7 34657 3.2 ZIC2 NR2F2 NR3C1 POLR2A ZNF664 SMARCA4 ZNF24 ESR1 ZBTB44 EPG5 ENSG00000267354 piR-45726-020 LOC112268408 lnc-SLC14A1-2 SLC14A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC112268408 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC112268408 Gene

Genomic Locations for LOC112268408 Gene
chr18:45,483,343-45,529,855
(GRCh38/hg38)
Size:
46,513 bases
Orientation:
Plus strand
chr18:43,063,310-43,109,820
(GRCh37/hg19)
Size:
46,511 bases
Orientation:
Plus strand

Genomic View for LOC112268408 Gene

Genes around LOC112268408 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC112268408 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC112268408 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for LOC112268408 Gene

Proteins for LOC112268408 Gene

Post-translational modifications for LOC112268408 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC112268408 Gene

Domains & Families for LOC112268408 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC112268408 Gene

Function for LOC112268408 Gene

Phenotypes From GWAS Catalog for LOC112268408 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC112268408 Gene

Localization for LOC112268408 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC112268408 Gene

Pathways & Interactions for LOC112268408 Gene

PathCards logo

SuperPathways for LOC112268408 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC112268408 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC112268408 Gene

Drugs & Compounds for LOC112268408 Gene

No Compound Related Data Available

Transcripts for LOC112268408 Gene

mRNA/cDNA for LOC112268408 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC112268408 Gene

No ASD Table

Relevant External Links for LOC112268408 Gene

GeneLoc Exon Structure for
LOC112268408

Expression for LOC112268408 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC112268408 Gene

Orthologs for LOC112268408 Gene

Evolution for LOC112268408 Gene

ENSEMBL:
Gene Tree for LOC112268408 (if available)
TreeFam:
Gene Tree for LOC112268408 (if available)

No data available for Orthologs for LOC112268408 Gene

Paralogs for LOC112268408 Gene

No data available for Paralogs for LOC112268408 Gene

Variants for LOC112268408 Gene

Additional dbSNP identifiers (rs#s) for LOC112268408 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC112268408 Gene

Disorders for LOC112268408 Gene

No disorders were found for LOC112268408 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC112268408 Gene

Publications for LOC112268408 Gene

No publications were found for LOC112268408 Gene.

No data available for Mastermind for LOC112268408 Gene

Products for LOC112268408 Gene

Sources for LOC112268408 Gene