Aliases for LOC112268199 Gene

Subcategory (RNA class) for LOC112268199 Gene

ncRNA

Aliases for LOC112268199 Gene

  • Uncharacterized LOC112268199 3

External Ids for LOC112268199 Gene

Previous GeneCards Identifiers for LOC112268199 Gene

  • GC17U902866

Summaries for LOC112268199 Gene

GeneCards Summary for LOC112268199 Gene

LOC112268199 (Uncharacterized LOC112268199) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC112268199 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC112268199 Gene

Genomics for LOC112268199 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC112268199 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J077415 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.7 +2.5 2516 32.5 SP1 CREB1 GATAD2A CTCF ZBTB33 ATF7 PRDM10 TFE3 IKZF1 NFKBIZ TMC8 METTL23 SRSF2 RHBDF2 SEPTIN9 LOC112268199 lnc-TMC6-12 ENSG00000200651 LOC112268198 ENSG00000279801
GH17J077402 Promoter/Enhancer 1.8 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +26.3 26297 11.3 SP1 TEAD4 PRDM10 BACH1 LARP7 PRDM1 ZNF143 ZSCAN4 TCF12 IKZF2 ENSG00000266998 MIR4316 LOC112268199 SEPTIN9 TNRC6C
GH17J077398 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +34.7 34669 3.4 HNRNPL CTCF ZNF143 REST RAD21 TRIM22 ZNF341 EED RUNX3 SMC3 MIR4316 LOC112268199 SEPTIN9 TNRC6C
GH17J077414 Enhancer 0.3 dbSUPER 0.4 +19.4 19373 0.6 RBM22 MNT MIR4316 LOC112268199 SEPTIN9 TNRC6C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC112268199 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC112268199 Gene

Genomic Locations for LOC112268199 Gene
chr17:77,427,969-77,434,473
(GRCh38/hg38)
Size:
6,505 bases
Orientation:
Minus strand

Genomic View for LOC112268199 Gene

Genes around LOC112268199 on UCSC Golden Path with GeneCards custom track
LOC112268199 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

LOC112268199 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC112268199 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC112268199 Gene

No data available for Cytogenetic band for LOC112268199 Gene

Proteins for LOC112268199 Gene

Post-translational modifications for LOC112268199 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC112268199 Gene

Domains & Families for LOC112268199 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC112268199 Gene

Function for LOC112268199 Gene

Phenotypes From GWAS Catalog for LOC112268199 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC112268199 Gene

Localization for LOC112268199 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC112268199 Gene

Pathways & Interactions for LOC112268199 Gene

PathCards logo

SuperPathways for LOC112268199 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC112268199 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC112268199 Gene

Drugs & Compounds for LOC112268199 Gene

No Compound Related Data Available

Transcripts for LOC112268199 Gene

LOC112268199 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC112268199 Gene

No ASD Table

Relevant External Links for LOC112268199 Gene

GeneLoc Exon Structure for
LOC112268199

No data available for mRNA/cDNA for LOC112268199 Gene

Expression for LOC112268199 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC112268199 Gene

Orthologs for LOC112268199 Gene

No data available for Orthologs and Evolution for LOC112268199 Gene

Paralogs for LOC112268199 Gene

No data available for Paralogs for LOC112268199 Gene

Variants for LOC112268199 Gene

Additional dbSNP identifiers (rs#s) for LOC112268199 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC112268199 Gene

Disorders for LOC112268199 Gene

No disorders were found for LOC112268199 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC112268199 Gene

Publications for LOC112268199 Gene

No publications were found for LOC112268199 Gene.

No data available for Mastermind for LOC112268199 Gene

Products for LOC112268199 Gene

Sources for LOC112268199 Gene