Aliases for LOC112268114 Gene

Subcategory (RNA class) for LOC112268114 Gene

lncRNA

Aliases for LOC112268114 Gene

  • Uncharacterized LOC112268114 3

External Ids for LOC112268114 Gene

Previous GeneCards Identifiers for LOC112268114 Gene

  • GC13U901581

Summaries for LOC112268114 Gene

GeneCards Summary for LOC112268114 Gene

LOC112268114 (Uncharacterized LOC112268114) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC112268114 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC112268114 Gene

Genomics for LOC112268114 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC112268114 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13J094705 Promoter/Enhancer 2.3 VISTA UCNEbase EPDnew Ensembl ENCODE dbSUPER 0.7 +3.3 3269 8.9 RNF2 ATF7 PRDM10 ZSCAN4 ZNF24 PATZ1 CTCF ZNF501 EZH2 ZNF341 LOC101927248 LINC00391 SOX21-AS1 TGDS GPR180 LOC112268114 SOX21
GH13J094715 Enhancer 0.5 Ensembl 0.7 -3.5 -3458 2.6 CTCF PRDM1 TRIM28 KDM1A RAD21 CBFA2T3 EZH2 RNU6-62P SOX21 LOC112268114 SOX21-AS1 BRD7P5 ABCC4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC112268114 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC112268114 Gene

Genomic Locations for LOC112268114 Gene
chr13:94,712,720-94,713,443
(GRCh38/hg38)
Size:
724 bases
Orientation:
Minus strand

Genomic View for LOC112268114 Gene

Genes around LOC112268114 on UCSC Golden Path with GeneCards custom track
LOC112268114 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

LOC112268114 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC112268114 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC112268114 Gene

No data available for Cytogenetic band for LOC112268114 Gene

Proteins for LOC112268114 Gene

Post-translational modifications for LOC112268114 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC112268114 Gene

Domains & Families for LOC112268114 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC112268114 Gene

Function for LOC112268114 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC112268114 Gene

Localization for LOC112268114 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC112268114 Gene

Pathways & Interactions for LOC112268114 Gene

PathCards logo

SuperPathways for LOC112268114 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC112268114 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC112268114 Gene

Drugs & Compounds for LOC112268114 Gene

No Compound Related Data Available

Transcripts for LOC112268114 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC112268114 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000D78002_9606 lncRNA 579 1

RefSeq: NR_158368,

LOC112268114 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for LOC112268114 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC112268114 Gene

No ASD Table

Relevant External Links for LOC112268114 Gene

GeneLoc Exon Structure for
LOC112268114

Expression for LOC112268114 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC112268114 Gene

Orthologs for LOC112268114 Gene

No data available for Orthologs and Evolution for LOC112268114 Gene

Paralogs for LOC112268114 Gene

No data available for Paralogs for LOC112268114 Gene

Variants for LOC112268114 Gene

Additional dbSNP identifiers (rs#s) for LOC112268114 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC112268114 Gene

Disorders for LOC112268114 Gene

No disorders were found for LOC112268114 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC112268114 Gene

Publications for LOC112268114 Gene

  1. Transcriptome analysis of human gastric cancer. (PMID: 16341674) Oh JH … Kim NS (Mammalian genome : official journal of the International Mammalian Genome Society 2005) 3

No data available for Mastermind for LOC112268114 Gene

Products for LOC112268114 Gene

Sources for LOC112268114 Gene