Aliases for LOC112268038 Gene

Subcategory (RNA class) for LOC112268038 Gene

ncRNA

Aliases for LOC112268038 Gene

  • Uncharacterized LOC112268038 3

External Ids for LOC112268038 Gene

Previous GeneCards Identifiers for LOC112268038 Gene

  • GC09U903045

Summaries for LOC112268038 Gene

GeneCards Summary for LOC112268038 Gene

LOC112268038 (Uncharacterized LOC112268038) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC112268038 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC112268038 Gene

Genomics for LOC112268038 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC112268038 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J105242 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +1.1 1071 5 BRCA1 SP1 HNRNPL GATAD2A CTCF PRDM10 ZNF629 TFE3 ZNF512 SIX5 SLC44A1 ENSG00000286536 LOC112268038 NONHSAG053105.2 lnc-ABCA1-8 FKTN RALGAPA1P1 FSD1L
GH09J105205 Enhancer 0.9 Ensembl ENCODE 0.3 +39.5 39465 2.2 PHB2 SP1 SCRT2 MNT RFX1 CEBPB TARDBP ZKSCAN1 TSC22D4 FOXA2 SLC44A1 RF00017-7786 lnc-ABCA1-5 ENSG00000286536 LOC112268038 ABCA1
GH09J105216 Enhancer 0.7 FANTOM5 Ensembl 0.3 +29.0 28964 1.6 SP1 SOX13 YY1 JUND HNF4A RXRA BHLHE40 SOX5 FOXA1 RAD21 SLC44A1 TAL2 FSD1L RF00017-7786 ENSG00000286536 LOC112268038 lnc-ABCA1-5 ABCA1
GH09J105233 Enhancer 0.5 Ensembl 0.4 +12.3 12264 1 PRDM10 ATF7 MAFK STAT1 PRDM6 MAFF SLC44A1 ENSG00000286536 RF00017-7786 LOC112268038 lnc-ABCA1-8 ABCA1
GH09J105232 Enhancer 0.4 Ensembl 0.4 +13.7 13664 0.2 PRDM10 JUND PRDM6 SREBF1 SLC44A1 ENSG00000286536 RF00017-7786 LOC112268038 lnc-ABCA1-8 ABCA1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC112268038 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC112268038 Gene

Genomic Locations for LOC112268038 Gene
chr9:105,198,637-105,245,965
(GRCh38/hg38)
Size:
47,329 bases
Orientation:
Minus strand

Genomic View for LOC112268038 Gene

Genes around LOC112268038 on UCSC Golden Path with GeneCards custom track
LOC112268038 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

LOC112268038 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC112268038 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC112268038 Gene

No data available for Cytogenetic band for LOC112268038 Gene

Proteins for LOC112268038 Gene

Post-translational modifications for LOC112268038 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC112268038 Gene

Domains & Families for LOC112268038 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC112268038 Gene

Function for LOC112268038 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC112268038 Gene

Localization for LOC112268038 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC112268038 Gene

Pathways & Interactions for LOC112268038 Gene

PathCards logo

SuperPathways for LOC112268038 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC112268038 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC112268038 Gene

Drugs & Compounds for LOC112268038 Gene

No Compound Related Data Available

Transcripts for LOC112268038 Gene

LOC112268038 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC112268038 Gene

No ASD Table

Relevant External Links for LOC112268038 Gene

GeneLoc Exon Structure for
LOC112268038

No data available for mRNA/cDNA for LOC112268038 Gene

Expression for LOC112268038 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC112268038 Gene

Orthologs for LOC112268038 Gene

No data available for Orthologs and Evolution for LOC112268038 Gene

Paralogs for LOC112268038 Gene

No data available for Paralogs for LOC112268038 Gene

Variants for LOC112268038 Gene

Additional dbSNP identifiers (rs#s) for LOC112268038 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC112268038 Gene

Disorders for LOC112268038 Gene

No disorders were found for LOC112268038 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC112268038 Gene

Publications for LOC112268038 Gene

No publications were found for LOC112268038 Gene.

No data available for Mastermind for LOC112268038 Gene

Products for LOC112268038 Gene

Sources for LOC112268038 Gene