Aliases for LOC112267968 Gene

Aliases for LOC112267968 Gene

  • Uncharacterized LOC112267968 3 5
  • Uncharacterized Protein LOC112267968 3
  • HSALNG0054723 167
  • NONHSAG045277 92
  • Lnc-TAGAP-1 168
  • AL356417.3 5

External Ids for LOC112267968 Gene

Previous GeneCards Identifiers for LOC112267968 Gene

  • GC06U903711

Summaries for LOC112267968 Gene

GeneCards Summary for LOC112267968 Gene

LOC112267968 (Uncharacterized LOC112267968) is a Protein Coding gene.

Additional gene information for LOC112267968 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC112267968 Gene

Genomics for LOC112267968 Gene

GeneHancer (GH) Regulatory Elements for LOC112267968 Gene

Promoters and enhancers for LOC112267968 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J159119 Promoter/Enhancer 0.9 FANTOM5 Ensembl ENCODE dbSUPER 500.7 +1.4 1412 1 LOC112267968 TAGAP ENSG00000226032
GH06J159121 Promoter/Enhancer 0.5 Ensembl dbSUPER 500.7 -0.2 -206 0.6 LOC112267968 lnc-FNDC1-2
GH06J159122 Enhancer 0.4 dbSUPER 500.7 -1.9 -1854 1.3 ZSCAN5C KLF5 RELB LOC112267968 FNDC1 lnc-FNDC1-2
GH06J159113 Promoter/Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +5.2 5201 5.1 ZBTB40 EP300 RBM25 BCL11A TCF12 SRF MAFK MEF2B SMARCA5 BCOR TAGAP LOC112267968 ENSG00000224478 ENSG00000226032
GH06J159103 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +14.4 14392 6.5 ZBTB40 CTCF NRF1 SP1 ZIC2 FOS TARDBP REST RAD21 CTBP1 TAGAP RSPH3 EZR LOC112267968 ENSG00000224478 ENSG00000226032
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC112267968 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC112267968 Gene

Genomic Locations for LOC112267968 Gene
chr6:159,051,674-159,121,495
(GRCh38/hg38)
Size:
69,822 bases
Orientation:
Minus strand

Genomic View for LOC112267968 Gene

Genes around LOC112267968 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC112267968 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC112267968 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC112267968 Gene

Proteins for LOC112267968 Gene

Post-translational modifications for LOC112267968 Gene

No Post-translational modifications

Other Protein References for LOC112267968 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC112267968 Gene

Domains & Families for LOC112267968 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC112267968 Gene

Function for LOC112267968 Gene

Phenotypes From GWAS Catalog for LOC112267968 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC112267968 Gene

Localization for LOC112267968 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC112267968 Gene

Pathways & Interactions for LOC112267968 Gene

PathCards logo

SuperPathways for LOC112267968 Gene

No Data Available

Interacting Proteins for LOC112267968 Gene

;

Gene Ontology (GO) - Biological Process for LOC112267968 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC112267968 Gene

Drugs & Compounds for LOC112267968 Gene

No Compound Related Data Available

Transcripts for LOC112267968 Gene

mRNA/cDNA for LOC112267968 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 RNACentral transcripts :
1 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC112267968 Gene

No ASD Table

Relevant External Links for LOC112267968 Gene

GeneLoc Exon Structure for
LOC112267968

Expression for LOC112267968 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC112267968 Gene

Orthologs for LOC112267968 Gene

Evolution for LOC112267968 Gene

ENSEMBL:
Gene Tree for LOC112267968 (if available)
TreeFam:
Gene Tree for LOC112267968 (if available)

No data available for Orthologs for LOC112267968 Gene

Paralogs for LOC112267968 Gene

No data available for Paralogs for LOC112267968 Gene

Variants for LOC112267968 Gene

Additional dbSNP identifiers (rs#s) for LOC112267968 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC112267968 Gene

Disorders for LOC112267968 Gene

No disorders were found for LOC112267968 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC112267968 Gene

Publications for LOC112267968 Gene

No publications were found for LOC112267968 Gene.

No data available for Mastermind for LOC112267968 Gene

Products for LOC112267968 Gene

Sources for LOC112267968 Gene