Aliases for LOC112267870 Gene

Data sources for LOC112267870 Gene:

Subcategory (RNA class) for LOC112267870 Gene

ncRNA

Aliases for LOC112267870 Gene

External Ids for LOC112267870 Gene

Previous GeneCards Identifiers for LOC112267870 Gene

  • GC18U901304

Summaries for LOC112267870 Gene

GeneCards Summary for LOC112267870 Gene

LOC112267870 (Uncharacterized LOC112267870) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC112267870 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC112267870 Gene

Genomics for LOC112267870 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC112267870 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J057426 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -6.1 -6074 17.3 ZSCAN16 CHD2 TBP FEZF1 MBD2 CTCF ZEB1 ZIC2 ZNF610 THAP11 ONECUT2 LINC02565 ST8SIA3 HSALNG0121763 ENSG00000277837 LOC112267870
GH18J057444 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.2 4162 2.7 CEBPA CTCF ZIC2 CEBPB REST FOXA2 MAX TRIM22 SMAD4 MAFF ST8SIA3 LOC112267870 ONECUT2 lnc-ONECUT2-2 FECH
GH18J057447 Enhancer 0.6 ENCODE 0.4 +6.0 6017 0.2 ZIC2 SIN3A REST CTCF RXRA YY1 EHMT2 MIER2 SP1 HNF4A ST8SIA3 LOC112267870 ONECUT2 lnc-ONECUT2-2 FECH
GH18J057466 Enhancer 0.5 Ensembl 0.3 +25.2 25244 1.2 CTCF RXRA EBF1 JUND HNF4A RAD21 ELF3 SP1 YY1 ST8SIA3 lnc-ONECUT2-2 LOC112267870 ONECUT2 FECH
GH18J057475 Enhancer 0.4 Ensembl 0.3 +34.8 34844 0.8 BCL6 SPI1 IKZF1 ST8SIA3 lnc-ONECUT2-2 LOC112267870 ONECUT2 FECH
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC112267870 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC112267870 Gene

Latest Assembly
chr18:57,441,357-57,469,778
(GRCh38/hg38)
Size:
28,422 bases
Orientation:
Plus strand

Genomic View for LOC112267870 Gene

Genes around LOC112267870 on UCSC Golden Path with GeneCards custom track
LOC112267870 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC112267870 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC112267870 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC112267870 Gene

Proteins for LOC112267870 Gene

Post-translational modifications for LOC112267870 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC112267870 Gene

Domains & Families for LOC112267870 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC112267870 Gene

Function for LOC112267870 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC112267870 Gene

Localization for LOC112267870 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC112267870 Gene

Pathways & Interactions for LOC112267870 Gene

PathCards logo

SuperPathways for LOC112267870 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC112267870 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC112267870 Gene

Drugs & Compounds for LOC112267870 Gene

No Compound Related Data Available

Transcripts for LOC112267870 Gene

LOC112267870 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC112267870 Gene

No ASD Table

Relevant External Links for LOC112267870 Gene

GeneLoc Exon Structure for
LOC112267870

No data available for mRNA/cDNA for LOC112267870 Gene

Expression for LOC112267870 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC112267870 Gene

Orthologs for LOC112267870 Gene

No data available for Orthologs and Evolution for LOC112267870 Gene

Paralogs for LOC112267870 Gene

No data available for Paralogs for LOC112267870 Gene

Variants for LOC112267870 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC112267870 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC112267870 Gene

Disorders for LOC112267870 Gene

No disorders were found for LOC112267870 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC112267870 Gene

Publications for LOC112267870 Gene

No publications were found for LOC112267870 Gene.

No data available for Mastermind for LOC112267870 Gene

Products for LOC112267870 Gene

Sources for LOC112267870 Gene