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Aliases for LOC111822952 Gene

Aliases for LOC111822952 Gene

  • Sharpr-MPRA Regulatory Regions 8228 And 8679 3
  • Sharpr-MPRA Regulatory Region 8228 3
  • Sharpr-MPRA Regulatory Region 8679 3

External Ids for LOC111822952 Gene

Summaries for LOC111822952 Gene

Entrez Gene Summary for LOC111822952 Gene

  • This genomic sequence was predicted to be a transcriptional regulatory region based on chromatin state analysis from the ENCODE (ENCyclopedia Of DNA Elements) project. It contains two overlapping sub-regions, where one sub-region was validated as a functional enhancer by the Sharpr-MPRA technique (Systematic high-resolution activation and repression profiling with reporter tiling using massively parallel reporter assays) in K562 erythroleukemia cells (group: K562 Activating DNase unmatched - State 1:Tss, active promoter, TSS/CpG island region). It also showed weak enhancer activity in HepG2 liver carcinoma cells (group: HepG2 Activating DNase unmatched - State 1:Tss). The other sub-region displayed weak repressive activity by Sharpr-MPRA in both HepG2 cells (group: HepG2 Repressive non-DNase unmatched - State 1:Tss) and K562 cells (group: K562 Repressive non-DNase unmatched - State 1:Tss). [provided by RefSeq, Jan 2018]

GeneCards Summary for LOC111822952 Gene

LOC111822952 (Sharpr-MPRA Regulatory Regions 8228 And 8679) is a Biological Region gene.

Additional gene information for LOC111822952 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC111822952 Gene

Genomics for LOC111822952 Gene

Genomic Locations for LOC111822952 Gene

Genomic Locations for LOC111822952 Gene
chr17:-
(GRCh38/hg38)
Orientation:
Unknown strand

Genomic View for LOC111822952 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for LOC111822952 Gene

No data available for GeneHancer (GH) Regulatory Elements for LOC111822952 Gene

Proteins for LOC111822952 Gene

Post-translational modifications for LOC111822952 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC111822952 Gene

Domains & Families for LOC111822952 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC111822952 Gene

Function for LOC111822952 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC111822952 Gene

Localization for LOC111822952 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC111822952 Gene

Pathways & Interactions for LOC111822952 Gene

PathCards logo

SuperPathways for LOC111822952 Gene

No Data Available

Interacting Proteins for LOC111822952 Gene

Gene Ontology (GO) - Biological Process for LOC111822952 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC111822952 Gene

Drugs & Compounds for LOC111822952 Gene

No Compound Related Data Available

Transcripts for LOC111822952 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC111822952 Gene

No ASD Table

No data available for mRNA/cDNA for LOC111822952 Gene

Expression for LOC111822952 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC111822952 Gene

Orthologs for LOC111822952 Gene

No data available for Orthologs and Evolution for LOC111822952 Gene

Paralogs for LOC111822952 Gene

No data available for Paralogs for LOC111822952 Gene

Variants for LOC111822952 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC111822952 Gene

Disorders for LOC111822952 Gene

No disorders were found for LOC111822952 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC111822952 Gene

Publications for LOC111822952 Gene

  1. Genome-scale high-resolution mapping of activating and repressive nucleotides in regulatory regions. (PMID: 27701403) Ernst J … Kellis M (Nature biotechnology 2016) 3 58

No data available for External Links for LOC111822952 Gene

Products for LOC111822952 Gene

Sources for LOC111822952 Gene

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