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Aliases for LOC110599568 Gene

Aliases for LOC110599568 Gene

  • MS43a Minisatellite Repeat Instability Region 3
  • D12S11 Minisatellite Repeat Instability Region 3

External Ids for LOC110599568 Gene

Summaries for LOC110599568 Gene

Entrez Gene Summary for LOC110599568 Gene

  • This region is a highly variable minisatellite region found within an intron of the polypeptide N-acetylgalactosaminyltransferase 9 (GALNT9) gene, on the q arm of chromosome 12. This minisatellite is an unstable GC-rich variable number tandem repeat (VNTR) with a 45 nucleotide consensus motif of tgtgtgtaatgggtatagggagggccccgggaagggggtgtggyg, relative to the minus strand of the reference genome. The repeat is an imperfect repeat, with a tandem array of similar, but non-identical repeats. Repeat instability has been observed in germline cells. [provided by RefSeq, Jul 2017]

GeneCards Summary for LOC110599568 Gene

LOC110599568 (MS43a Minisatellite Repeat Instability Region) is a Biological Region gene.

Additional gene information for LOC110599568 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC110599568 Gene

Genomics for LOC110599568 Gene

Genomic Locations for LOC110599568 Gene

Genomic Locations for LOC110599568 Gene
chr12:-
(GRCh38/hg38)
Orientation:
Unknown strand

Genomic View for LOC110599568 Gene


Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for LOC110599568 Gene

No data available for GeneHancer (GH) Regulatory Elements for LOC110599568 Gene

Proteins for LOC110599568 Gene

Post-translational modifications for LOC110599568 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC110599568 Gene

Domains & Families for LOC110599568 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC110599568 Gene

Function for LOC110599568 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC110599568 Gene

Localization for LOC110599568 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC110599568 Gene

Pathways & Interactions for LOC110599568 Gene

PathCards logo

SuperPathways for LOC110599568 Gene

No Data Available

Interacting Proteins for LOC110599568 Gene

Gene Ontology (GO) - Biological Process for LOC110599568 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC110599568 Gene

Drugs & Compounds for LOC110599568 Gene

No Compound Related Data Available

Transcripts for LOC110599568 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC110599568 Gene

No ASD Table

No data available for mRNA/cDNA for LOC110599568 Gene

Expression for LOC110599568 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC110599568 Gene

Orthologs for LOC110599568 Gene

No data available for Orthologs and Evolution for LOC110599568 Gene

Paralogs for LOC110599568 Gene

No data available for Paralogs for LOC110599568 Gene

Variants for LOC110599568 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC110599568 Gene

Disorders for LOC110599568 Gene

No disorders were found for LOC110599568 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC110599568 Gene

Publications for LOC110599568 Gene

  1. Study of three hypervariable DNA loci (D1S7; D7S22 and D12S11) in three European populations. (PMID: 9483206) Papiha SS … Chakraborty R (Annals of human biology 1998) 3 58
  2. Frequent rearrangements at minisatellite loci D1S7 (1p33-35), D7S22 (7q36-ter) and D12S11 (12q24.3-ter) in hepatitis B virus-positive hepatocellular carcinomas from Thai patients. (PMID: 9219828) Kaplanski C … Wild CP (International journal of cancer 1997) 3 58
  3. Recent observations in human DNA-minisatellite mutations. (PMID: 7599098) Henke J … Henke L (International journal of legal medicine 1995) 3 58
  4. A validation study of four single locus probes (MS1, MS31, MS43 and g3) in a Korean population--further evaluation for paternity testing. (PMID: 8593203) Lee KO … Lee KP (Journal of Korean medical science 1995) 3 58
  5. Complex gene conversion events in germline mutation at human minisatellites. (PMID: 8162067) Jeffreys AJ … Armour JA (Nature genetics 1994) 3 58

No data available for External Links for LOC110599568 Gene

Products for LOC110599568 Gene

Sources for LOC110599568 Gene

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