Aliases for LOC108783645-001 Gene

Subcategory (RNA class) for LOC108783645-001 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for LOC108783645-001 Gene

  • Lnc-HIST1H1T-1 168
  • NONHSAG043228 92
  • HSALNG0048728 167

No data available for External Ids for LOC108783645-001 Gene

Summaries for LOC108783645-001 Gene

GeneCards Summary for LOC108783645-001 Gene

LOC108783645-001 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC108783645-001 Gene


  • Search for LOC108783645-001 at DataMed
  • Search for LOC108783645-001 at HumanCyc

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC108783645-001 Gene

Genomics for LOC108783645-001 Gene

GeneHancer (GH) Regulatory Elements for LOC108783645-001 Gene

Promoters and enhancers for LOC108783645-001 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J026086 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.7 +3.5 3500 2.8 POLR2G NCOR1 GTF2E2 POLR2A ZBTB10 ZBTB11 ZBTB26 TARDBP TOE1 CTBP1 HFE NONHSAG043229.2 ENSG00000272462 H1-2 H1-6 LARP1P1 BTN3A2 LOC108783645-001
GH06J026087 Enhancer 0.3 ENCODE 0.4 +5.1 5148 0.2 PKNOX1 HFE NONHSAG043229.2 ENSG00000272462 H1-2 H1-6 LARP1P1 LOC108783645-001 piR-40742-005
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC108783645-001 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC108783645-001 Gene

Genomic Locations for LOC108783645-001 Gene
chr6:26,086,290-26,091,576
(GRCh38/hg38)
Size:
5,287 bases
Orientation:
Minus strand

Genomic View for LOC108783645-001 Gene

Genes around LOC108783645-001 on UCSC Golden Path with GeneCards custom track

LOC108783645-001 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC108783645-001 Gene

No data available for Cytogenetic band and RefSeq DNA sequence for LOC108783645-001 Gene

Proteins for LOC108783645-001 Gene

Post-translational modifications for LOC108783645-001 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC108783645-001 Gene

Domains & Families for LOC108783645-001 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC108783645-001 Gene

Function for LOC108783645-001 Gene

Phenotypes From GWAS Catalog for LOC108783645-001 Gene

miRNA for LOC108783645-001 Gene

miRTarBase miRNAs that target LOC108783645-001

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for LOC108783645-001 Gene

Localization for LOC108783645-001 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC108783645-001 Gene

Pathways & Interactions for LOC108783645-001 Gene

PathCards logo

SuperPathways for LOC108783645-001 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC108783645-001 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC108783645-001 Gene

Drugs & Compounds for LOC108783645-001 Gene

No Compound Related Data Available

Transcripts for LOC108783645-001 Gene

mRNA/cDNA for LOC108783645-001 Gene

3 RNACentral transcripts :
1 REFSEQ mRNAs :
2 NONCODE transcripts :
1 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC108783645-001 Gene

No ASD Table

Relevant External Links for LOC108783645-001 Gene

GeneLoc Exon Structure for
LOC108783645-001

Expression for LOC108783645-001 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC108783645-001 Gene

Orthologs for LOC108783645-001 Gene

No data available for Orthologs and Evolution for LOC108783645-001 Gene

Paralogs for LOC108783645-001 Gene

No data available for Paralogs for LOC108783645-001 Gene

Variants for LOC108783645-001 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC108783645-001 Gene

Disorders for LOC108783645-001 Gene

No disorders were found for LOC108783645-001 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC108783645-001 Gene

Publications for LOC108783645-001 Gene

No publications were found for LOC108783645-001 Gene.

No data available for Mastermind for LOC108783645-001 Gene

Products for LOC108783645-001 Gene

Sources for LOC108783645-001 Gene