Aliases for LOC107987013 Gene

Aliases for LOC107987013 Gene

  • Putative Uncharacterized Protein DDB_G0287265 3
  • Novel Transcript 5
  • NONHSAG053176 92
  • Lnc-PTPN3-2 168
  • AL158829.1 5

External Ids for LOC107987013 Gene

Previous GeneCards Identifiers for LOC107987013 Gene

  • GC09U902838

Summaries for LOC107987013 Gene

GeneCards Summary for LOC107987013 Gene

LOC107987013 (Putative Uncharacterized Protein DDB_G0287265) is a Protein Coding gene.

Additional gene information for LOC107987013 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC107987013 Gene

Genomics for LOC107987013 Gene

GeneHancer (GH) Regulatory Elements for LOC107987013 Gene

Promoters and enhancers for LOC107987013 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J109770 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +0.9 942 3.8 ZSCAN5C TEAD4 NFE2 JUND PRDM6 FEZF1 NFE2L2 SRF ZNF366 PRDM10 LOC107987013 PALM2 RF00017-7807 PALM2AKAP2
GH09J109745 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 12.1 +26.1 26142 2.2 EP300 ZIC2 ZNF423 TRIM28 OSR2 WT1 ZBTB17 JUND ZNF335 IKZF3 LOC107987013 PALM2 PALM2AKAP2 RF00017-7807
GH09J109792 Enhancer 1 Ensembl ENCODE dbSUPER 11.1 -21.3 -21258 4.2 JUND FOS REST FOXA1 TBX3 FOXA2 NR2F2 FOSL2 CEBPB ZBTB33 LOC107987013 AKAP2 PALM2 piR-48553-337 PALM2AKAP2
GH09J109751 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 12.1 +20.7 20683 1.3 CTCF FOXA2 PRDM6 ZNF664 FEZF1 RAD21 MAZ MZF1 GATAD2A FOXA1 LOC107987013 PALM2AKAP2 PALM2 RF00017-7807
GH09J109742 Enhancer 0.8 Ensembl ENCODE CraniofacialAtlas 12.1 +29.0 29042 1.2 ZNF341 SRF SIX5 ZNF143 PRDM10 LOC107987013 PALM2 PALM2AKAP2 RF00017-7807
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC107987013 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC107987013 Gene

Genomic Locations for LOC107987013 Gene
chr9:109,760,360-109,772,043
(GRCh38/hg38)
Size:
11,684 bases
Orientation:
Minus strand
chr9:112,522,640-112,534,323
(GRCh37/hg19)
Size:
11,684 bases
Orientation:
Minus strand

Genomic View for LOC107987013 Gene

Genes around LOC107987013 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC107987013 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC107987013 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC107987013 Gene

Proteins for LOC107987013 Gene

Post-translational modifications for LOC107987013 Gene

No Post-translational modifications

Other Protein References for LOC107987013 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC107987013 Gene

Domains & Families for LOC107987013 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC107987013 Gene

Function for LOC107987013 Gene

Phenotypes From GWAS Catalog for LOC107987013 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC107987013 Gene

Localization for LOC107987013 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC107987013 Gene

Pathways & Interactions for LOC107987013 Gene

PathCards logo

SuperPathways for LOC107987013 Gene

No Data Available

Interacting Proteins for LOC107987013 Gene

;

Gene Ontology (GO) - Biological Process for LOC107987013 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC107987013 Gene

Drugs & Compounds for LOC107987013 Gene

No Compound Related Data Available

Transcripts for LOC107987013 Gene

mRNA/cDNA for LOC107987013 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 RNACentral transcripts :
2 NONCODE transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC107987013 Gene

No ASD Table

Relevant External Links for LOC107987013 Gene

GeneLoc Exon Structure for
LOC107987013

Expression for LOC107987013 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC107987013 Gene

Orthologs for LOC107987013 Gene

Evolution for LOC107987013 Gene

ENSEMBL:
Gene Tree for LOC107987013 (if available)
TreeFam:
Gene Tree for LOC107987013 (if available)

No data available for Orthologs for LOC107987013 Gene

Paralogs for LOC107987013 Gene

No data available for Paralogs for LOC107987013 Gene

Variants for LOC107987013 Gene

Additional dbSNP identifiers (rs#s) for LOC107987013 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC107987013 Gene

Disorders for LOC107987013 Gene

No disorders were found for LOC107987013 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC107987013 Gene

Publications for LOC107987013 Gene

No publications were found for LOC107987013 Gene.

No data available for Mastermind for LOC107987013 Gene

Products for LOC107987013 Gene

Sources for LOC107987013 Gene