Aliases for LOC107986453 Gene

Aliases for LOC107986453 Gene

  • Uncharacterized LOC107986453 3 5
  • Uncharacterized Protein LOC107986453 3
  • NONHSAG041617 92
  • HSALNG0045056 167
  • CTC-321K16.1 3
  • Lnc-TGFBI-80 168
  • AC114296.1 5

External Ids for LOC107986453 Gene

Previous GeneCards Identifiers for LOC107986453 Gene

  • GC05U902658

Summaries for LOC107986453 Gene

GeneCards Summary for LOC107986453 Gene

LOC107986453 (Uncharacterized LOC107986453) is a Protein Coding gene.

Additional gene information for LOC107986453 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC107986453 Gene

Genomics for LOC107986453 Gene

GeneHancer (GH) Regulatory Elements for LOC107986453 Gene

Promoters and enhancers for LOC107986453 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J135821 Enhancer 0.9 FANTOM5 Ensembl ENCODE 12.3 +9.1 9134 1.6 ZIC2 RFX1 CEBPG TCF12 NFE2 ATF4 CEBPB EP300 SP1 ATF3 LOC107986453 ENSG00000250167 piR-41880-021 lnc-TGFBI-4 SLC25A48
GH05J135728 Enhancer 0.7 Ensembl CraniofacialAtlas 14.3 -83.4 -83366 1.4 CTCF SMC3 ZNF654 RAD21 ZNF350 ZNF660 TRIM22 ZSCAN4 PRDM1 piR-41245-230 ENSG00000250167 LOC107986453 SLC25A48 lnc-CXCL14-2
GH05J135704 Enhancer 0.8 Ensembl ENCODE 12.2 -107.0 -107023 1.7 ZNF184 FOS PBX2 ZBTB1 GATA3 ZNF189 ZFP37 ZNF324 INSM2 ZNF366 LOC107986453 SLC25A48 lnc-CXCL14-2 piR-41245-230 RF00017-4906
GH05J135709 Enhancer 0.7 Ensembl CraniofacialAtlas 12.3 -102.5 -102511 1.3 ZIC2 TRIM28 ZNF335 NFIL3 HLF ZNF660 ZNF600 LOC107986453 piR-41245-230 lnc-CXCL14-2 SLC25A48 RF00017-4906
GH05J135859 Enhancer 0.6 Ensembl 11.3 +50.4 50434 7.4 CEBPB CEBPG FOS ATF4 HLF JUND JUN ATF7 ZSCAN4 STAT3 SLC25A48 ENSG00000254239 IL9 LOC107986453 ENSG00000250167 lnc-TGFBI-4 piR-41880-021
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC107986453 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC107986453 Gene

Genomic Locations for LOC107986453 Gene
chr5:135,812,667-135,827,546
(GRCh38/hg38)
Size:
14,880 bases
Orientation:
Plus strand
chr5:135,148,356-135,162,271
(GRCh37/hg19)
Size:
13,916 bases
Orientation:
Plus strand

Genomic View for LOC107986453 Gene

Genes around LOC107986453 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC107986453 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC107986453 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC107986453 Gene

Proteins for LOC107986453 Gene

Post-translational modifications for LOC107986453 Gene

No Post-translational modifications

Other Protein References for LOC107986453 Gene

No data available for DME Specific Peptides for LOC107986453 Gene

Domains & Families for LOC107986453 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC107986453 Gene

Function for LOC107986453 Gene

Phenotypes From GWAS Catalog for LOC107986453 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC107986453 Gene

Localization for LOC107986453 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC107986453 Gene

Pathways & Interactions for LOC107986453 Gene

PathCards logo

SuperPathways for LOC107986453 Gene

No Data Available

Interacting Proteins for LOC107986453 Gene

;

Gene Ontology (GO) - Biological Process for LOC107986453 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC107986453 Gene

Drugs & Compounds for LOC107986453 Gene

No Compound Related Data Available

Transcripts for LOC107986453 Gene

mRNA/cDNA for LOC107986453 Gene

1 REFSEQ mRNAs :
7 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
18 RNACentral transcripts :
7 NONCODE transcripts :
1 LncBook transcripts :
12 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC107986453 Gene

No ASD Table

Relevant External Links for LOC107986453 Gene

GeneLoc Exon Structure for
LOC107986453

Expression for LOC107986453 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC107986453 Gene

Orthologs for LOC107986453 Gene

Evolution for LOC107986453 Gene

ENSEMBL:
Gene Tree for LOC107986453 (if available)
TreeFam:
Gene Tree for LOC107986453 (if available)

No data available for Orthologs for LOC107986453 Gene

Paralogs for LOC107986453 Gene

No data available for Paralogs for LOC107986453 Gene

Variants for LOC107986453 Gene

Additional dbSNP identifiers (rs#s) for LOC107986453 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC107986453 Gene

Disorders for LOC107986453 Gene

No disorders were found for LOC107986453 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC107986453 Gene

Publications for LOC107986453 Gene

No publications were found for LOC107986453 Gene.

No data available for Mastermind for LOC107986453 Gene

Products for LOC107986453 Gene

Sources for LOC107986453 Gene