Aliases for LOC107985290 Gene

Subcategory (RNA class) for LOC107985290 Gene

ncRNA

Aliases for LOC107985290 Gene

  • Uncharacterized LOC107985290 3

External Ids for LOC107985290 Gene

Previous GeneCards Identifiers for LOC107985290 Gene

  • GC19U902274
  • GC19M038905

Summaries for LOC107985290 Gene

GeneCards Summary for LOC107985290 Gene

LOC107985290 (Uncharacterized LOC107985290) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC107985290 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC107985290 Gene

Genomics for LOC107985290 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC107985290 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J038529 Enhancer 0.5 Ensembl 600.7 -1.0 -1046 0.4 POLR2A ZBTB44 OSR2 CBLL2 ZNF571 ENSG00000269445 LOC107985290 ZFP30 ZNF573 ZNF607 SUPT5H ACTN4 FAM98C ENSG00000225868 RYR1
GH19J038527 Enhancer 0.3 ENCODE 600.7 +0.6 619 0 SP3 KLF14 ENSG00000269445 LOC107985290 RYR1 RASGRP4 NONHSAG025741.2 MAP4K1
GH19J038514 Enhancer 1 Ensembl ENCODE 0.4 +13.4 13354 0.8 HNRNPL CTCF ZBTB33 PRDM10 ZNF692 JUND ZNF143 PATZ1 REST RAD21 ECH1 LGALS7 LOC107985290 ENSG00000269445 NONHSAG025741.2 RYR1 MAP4K1
GH19J038506 Enhancer 0.8 ENCODE 0.4 +21.4 21449 0.3 ZNF692 MTA2 ZIC2 PATZ1 REST HDAC1 ZNF600 ZNF341 NRF1 KLF9 ZFP36 NONHSAG025741.2 ENSG00000269445 LOC107985290 RYR1 MAP4K1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC107985290 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC107985290 Gene

Genomic Locations for LOC107985290 Gene
chr19:38,525,613-38,528,555
(GRCh38/hg38)
Size:
2,943 bases
Orientation:
Minus strand

Genomic View for LOC107985290 Gene

Genes around LOC107985290 on UCSC Golden Path with GeneCards custom track
LOC107985290 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC107985290 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC107985290 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC107985290 Gene

Proteins for LOC107985290 Gene

Post-translational modifications for LOC107985290 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC107985290 Gene

Domains & Families for LOC107985290 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC107985290 Gene

Function for LOC107985290 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC107985290 Gene

Localization for LOC107985290 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC107985290 Gene

Pathways & Interactions for LOC107985290 Gene

PathCards logo

SuperPathways for LOC107985290 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC107985290 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC107985290 Gene

Drugs & Compounds for LOC107985290 Gene

No Compound Related Data Available

Transcripts for LOC107985290 Gene

LOC107985290 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC107985290 Gene

No ASD Table

Relevant External Links for LOC107985290 Gene

GeneLoc Exon Structure for
LOC107985290

No data available for mRNA/cDNA for LOC107985290 Gene

Expression for LOC107985290 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC107985290 Gene

Orthologs for LOC107985290 Gene

No data available for Orthologs and Evolution for LOC107985290 Gene

Paralogs for LOC107985290 Gene

No data available for Paralogs for LOC107985290 Gene

Variants for LOC107985290 Gene

Additional dbSNP identifiers (rs#s) for LOC107985290 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC107985290 Gene

Disorders for LOC107985290 Gene

No disorders were found for LOC107985290 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC107985290 Gene

Publications for LOC107985290 Gene

No publications were found for LOC107985290 Gene.

No data available for Mastermind for LOC107985290 Gene

Products for LOC107985290 Gene

Sources for LOC107985290 Gene