Aliases for LOC107985184 Gene

Subcategory (RNA class) for LOC107985184 Gene

lncRNA

Aliases for LOC107985184 Gene

  • Uncharacterized LOC107985184 3

External Ids for LOC107985184 Gene

Previous GeneCards Identifiers for LOC107985184 Gene

  • GC01U905611

Summaries for LOC107985184 Gene

GeneCards Summary for LOC107985184 Gene

LOC107985184 (Uncharacterized LOC107985184) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC107985184 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC107985184 Gene

Genomics for LOC107985184 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC107985184 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J111618 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.2 -213 4.6 RNF2 ARHGAP35 PRDM10 ZNF512 IKZF1 POLR2A RCOR2 BACH1 LARP7 PRDM1 RAP1A LOC107985184 RNU6-151P KRT18P57 ATP5PB WDR77 INKA2 UBE2FP3 LINC01160 PIFO
GH01J111615 Promoter/Enhancer 1.3 Ensembl ENCODE dbSUPER 0.7 +4.1 4059 2.2 IKZF1 STAT3 RELA PKNOX1 IKZF2 RCOR1 TRIM22 POLR2A EED DPF2 RAP1A KRT18P57 RNU6-151P ATP5PB WDR77 UBE2FP3 PIFO HSALNG0006064 LOC107985184 TMIGD3
GH01J111629 Promoter/Enhancer 0.8 Ensembl dbSUPER 0.7 -4.9 -4903 0.2 ZNF316 MAFF MAFK MAFG PRDM6 ZMYM3 EMSY KRT18P57 RNU6-151P LOC107985184 piR-48327-002 TMIGD3 RAP1A DDX20
GH01J111639 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -19.7 -19711 0.9 HDAC1 SOX6 EP300 SOX13 HMBOX1 NCOR1 FOXP1 FOXM1 NR2F1 TAL1 C1orf162 piR-48327-002 LOC107985184 TMIGD3 RAP1A DDX20
GH01J111624 Enhancer 0.6 ENCODE dbSUPER 0.7 -4.1 -4058 0.7 BATF WRNIP1 TBP ATF7 BHLHE40 ZNF687 RAP1A RNU6-151P KRT18P57 WDR77 ATP5PB C1orf162 UBE2FP3 LOC107985184 piR-48327-002 TMIGD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC107985184 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC107985184 Gene

Genomic Locations for LOC107985184 Gene
chr1:111,617,611-111,620,398
(GRCh38/hg38)
Size:
2,788 bases
Orientation:
Minus strand

Genomic View for LOC107985184 Gene

Genes around LOC107985184 on UCSC Golden Path with GeneCards custom track
LOC107985184 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC107985184 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC107985184 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC107985184 Gene

Proteins for LOC107985184 Gene

Post-translational modifications for LOC107985184 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC107985184 Gene

Domains & Families for LOC107985184 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC107985184 Gene

Function for LOC107985184 Gene

Phenotypes From GWAS Catalog for LOC107985184 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC107985184 Gene

Localization for LOC107985184 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC107985184 Gene

Pathways & Interactions for LOC107985184 Gene

PathCards logo

SuperPathways for LOC107985184 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC107985184 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC107985184 Gene

Drugs & Compounds for LOC107985184 Gene

No Compound Related Data Available

Transcripts for LOC107985184 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for LOC107985184 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000E60A45_9606 lncRNA 2678 1

RefSeq: NR_160737,

LOC107985184 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC107985184 Gene

No ASD Table

Relevant External Links for LOC107985184 Gene

GeneLoc Exon Structure for
LOC107985184

No data available for mRNA/cDNA for LOC107985184 Gene

Expression for LOC107985184 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC107985184 Gene

Orthologs for LOC107985184 Gene

No data available for Orthologs and Evolution for LOC107985184 Gene

Paralogs for LOC107985184 Gene

No data available for Paralogs for LOC107985184 Gene

Variants for LOC107985184 Gene

Additional dbSNP identifiers (rs#s) for LOC107985184 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC107985184 Gene

Disorders for LOC107985184 Gene

No disorders were found for LOC107985184 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC107985184 Gene

Publications for LOC107985184 Gene

No publications were found for LOC107985184 Gene.

No data available for Mastermind for LOC107985184 Gene

Products for LOC107985184 Gene

Sources for LOC107985184 Gene