Aliases for LOC107984127 Gene

Data sources for LOC107984127 Gene:

RNA type for LOC107984127 Gene

ncRNA

Aliases for LOC107984127 Gene

External Ids for LOC107984127 Gene

Previous GeneCards Identifiers for LOC107984127 Gene

  • GC09U902829

Summaries for LOC107984127 Gene

GeneCards Summary for LOC107984127 Gene

LOC107984127 (Uncharacterized LOC107984127) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC107984127 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC107984127 Gene

Genomics for LOC107984127 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC107984127 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J125797 Enhancer 0.4 Ensembl 250.7 +0.6 609 0.8 YY1 HNF4A SP1 LOC107984127 FJ601684-469 PBX3 MVB12B
GH09J125829 Enhancer 1.2 UCNEbase FANTOM5 ENCODE 0.3 +32.6 32618 1.4 YY1 IRF4 BATF NFATC1 RAD21 ATF2 JUNB POLR2A MEIS2 PKNOX1 PBX3 ENSG00000229582 RF00017-7310 FJ601684-469 HSALNG0074416 LOC107984127 MVB12B
GH09J125843 Enhancer 1.1 UCNEbase CraniofacialAtlas 0.3 +46.3 46264 0.7 ZNF600 ZNF580 ZIC2 FEZF1 ZNF610 ZNF843 PRDM6 ZNF2 ZNF189 SP7 HSALNG0074416 RF00017-7310 LOC107984127 PBX3 MVB12B
GH09J125850 Enhancer 1.1 UCNEbase Ensembl 0.2 +53.5 53509 0.6 CEBPA YY1 CEBPB FEZF1 EP300 THAP11 FOXA2 SMAD4 SAP130 RARA PBX3 ENSG00000229582 HSALNG0074416 RF00017-7311 LOC107984127 MVB12B
GH09J125823 Enhancer 0.7 ENCODE 0.3 +26.8 26830 1.4 ZNF580 BCL11A IRF2 IRF4 CBFB BATF SCRT1 IKZF1 BMI1 NR2F1 PBX3 FJ601684-469 RF00017-7310 LOC107984127 MVB12B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC107984127 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC107984127 Gene

Latest Assembly
chr9:125,797,392-125,853,596
(GRCh38/hg38)
Size:
56,205 bases
Orientation:
Plus strand

Genomic View for LOC107984127 Gene

Genes around LOC107984127 on UCSC Golden Path with GeneCards custom track
LOC107984127 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC107984127 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC107984127 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC107984127 Gene

Proteins for LOC107984127 Gene

Post-translational modifications for LOC107984127 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC107984127 Gene

Domains & Families for LOC107984127 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC107984127 Gene

Function for LOC107984127 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC107984127 Gene

Localization for LOC107984127 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC107984127 Gene

Pathways & Interactions for LOC107984127 Gene

PathCards logo

SuperPathways for LOC107984127 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC107984127 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC107984127 Gene

Drugs & Compounds for LOC107984127 Gene

No Compound Related Data Available

Transcripts for LOC107984127 Gene

LOC107984127 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC107984127 Gene

No ASD Table

Relevant External Links for LOC107984127 Gene

GeneLoc Exon Structure for
LOC107984127

No data available for mRNA/cDNA for LOC107984127 Gene

Expression for LOC107984127 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC107984127 Gene

Orthologs for LOC107984127 Gene

No data available for Orthologs and Evolution for LOC107984127 Gene

Paralogs for LOC107984127 Gene

No data available for Paralogs for LOC107984127 Gene

Variants for LOC107984127 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC107984127 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC107984127 Gene

Disorders for LOC107984127 Gene

No disorders were found for LOC107984127 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC107984127 Gene

Publications for LOC107984127 Gene

No publications were found for LOC107984127 Gene.

No data available for Mastermind for LOC107984127 Gene

Products for LOC107984127 Gene

Sources for LOC107984127 Gene