Aliases for LOC105379395 Gene

Subcategory (RNA class) for LOC105379395 Gene

ncRNA

Aliases for LOC105379395 Gene

  • Uncharacterized LOC105379395 3

External Ids for LOC105379395 Gene

Previous GeneCards Identifiers for LOC105379395 Gene

  • GC08U902314

Summaries for LOC105379395 Gene

GeneCards Summary for LOC105379395 Gene

LOC105379395 (Uncharacterized LOC105379395) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379395 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379395 Gene

Genomics for LOC105379395 Gene

GeneHancer (GH) Regulatory Elements for LOC105379395 Gene

Promoters and enhancers for LOC105379395 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J042296 Enhancer 1.1 Ensembl ENCODE dbSUPER 500.7 +1.3 1319 5.9 FOS KLF4 EP300 POLR2G CEBPB CHD2 NR2F2 FOSL1 GTF2F1 GATA3 LOC105379395 POLB IKBKB ENSG00000253408 VDAC3 DKK4 RF00017-7006 RF00017-7003
GH08J042289 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.7 -5723 5.8 ZBTB40 SP1 EP300 ZIC2 RELA MEF2C RCOR1 TRIM22 NFYB BCL11A POLB IKBKB ENSG00000253408 DKK4 ANK1 LOC105379395 RF00017-7003
GH08J042284 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -12.2 -12247 2 SP1 EP300 RELA RCOR1 BCL11A ZNF384 NBN SMARCA5 BATF IRF4 POLB AP3M2 ANK1 PLAT LOC105379395 IKBKB RF00017-7003
GH08J042276 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -19.5 -19547 6.6 ZIC2 CTCF GATA3 FOXP1 FOXP2 SCRT1 RCOR1 GLIS1 EGR2 ZNF362 POLB PLAT AP3M2 IKBKB LOC105379395 RF00017-7003
GH08J042305 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +7.5 7453 1.8 NR2F2 GATA3 KLF9 MAX BHLHE40 POLB PLAT ENSG00000253408 IKBKB DKK4 VDAC3 LOC105379395 RF00017-7006 RF00017-7003
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379395 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105379395 Gene

Genomic Locations for LOC105379395 Gene
chr8:42,297,848-42,301,357
(GRCh38/hg38)
Size:
3,510 bases
Orientation:
Plus strand

Genomic View for LOC105379395 Gene

Genes around LOC105379395 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105379395 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379395 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379395 Gene

Proteins for LOC105379395 Gene

Post-translational modifications for LOC105379395 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379395 Gene

Domains & Families for LOC105379395 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379395 Gene

Function for LOC105379395 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379395 Gene

Localization for LOC105379395 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379395 Gene

Pathways & Interactions for LOC105379395 Gene

PathCards logo

SuperPathways for LOC105379395 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105379395 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379395 Gene

Drugs & Compounds for LOC105379395 Gene

No Compound Related Data Available

Transcripts for LOC105379395 Gene

mRNA/cDNA for LOC105379395 Gene

1 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379395 Gene

No ASD Table

Relevant External Links for LOC105379395 Gene

GeneLoc Exon Structure for
LOC105379395

Expression for LOC105379395 Gene

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379395 Gene

Orthologs for LOC105379395 Gene

No data available for Orthologs and Evolution for LOC105379395 Gene

Paralogs for LOC105379395 Gene

No data available for Paralogs for LOC105379395 Gene

Variants for LOC105379395 Gene

Additional dbSNP identifiers (rs#s) for LOC105379395 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379395 Gene

Disorders for LOC105379395 Gene

No disorders were found for LOC105379395 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379395 Gene

Publications for LOC105379395 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 54

No data available for Mastermind for LOC105379395 Gene

Products for LOC105379395 Gene

Sources for LOC105379395 Gene