Aliases for LOC105379391 Gene

Subcategory (RNA class) for LOC105379391 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for LOC105379391 Gene

  • Uncharacterized LOC105379391 3 5
  • NONHSAG050068 92
  • Lnc-GOLGA7-4 168
  • AC016868.1 5

External Ids for LOC105379391 Gene

Previous GeneCards Identifiers for LOC105379391 Gene

  • GC08U902372

Summaries for LOC105379391 Gene

GeneCards Summary for LOC105379391 Gene

LOC105379391 (Uncharacterized LOC105379391) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for LOC105379391 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379391 Gene

Genomics for LOC105379391 Gene

GeneHancer (GH) Regulatory Elements for LOC105379391 Gene

Promoters and enhancers for LOC105379391 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J041465 Enhancer 1 Ensembl ENCODE 0.3 +31.5 31503 3.6 TRIM28 KLF4 CTBP1 MYC SIN3A ZNF282 FOXA2 ZBTB17 TRIM24 CEBPG GOLGA7 LOC105379391
GH08J041430 Enhancer 0.7 ENCODE 0.4 -5.0 -5021 0.1 CTCF ZNF10 REST MYC RAD21 SMC3 ZNF184 SMARCA5 ELF1 ZNF654 lnc-GOLGA7-5 LOC105379391
GH08J041458 Enhancer 0.8 ENCODE 0.4 +23.0 23019 0.2 ZBTB11 RFX1 HINFP RELA ZNF592 MYNN BMI1 GTF2A2 PBX2 ZNF644 LOC105379391 GOLGA7
GH08J041472 Enhancer 0.6 Ensembl 0.3 +37.9 37903 1.2 NR2F2 NR2C1 NR2F1 RCOR1 REST RXRA NR2F6 HNF4A CHD2 GATA2 GINS4 GOLGA7 LOC105379391
GH08J041477 Enhancer 0.4 Ensembl ENCODE 0.3 +42.4 42378 1 FOS GOLGA7 LOC105379391
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379391 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105379391 Gene

Genomic Locations for LOC105379391 Gene
chr8:41,435,298-41,440,419
(GRCh38/hg38)
Size:
5,122 bases
Orientation:
Plus strand
chr8:41,292,817-41,297,938
(GRCh37/hg19)
Size:
5,122 bases
Orientation:
Plus strand

Genomic View for LOC105379391 Gene

Genes around LOC105379391 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105379391 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379391 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379391 Gene

Proteins for LOC105379391 Gene

Post-translational modifications for LOC105379391 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379391 Gene

Domains & Families for LOC105379391 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379391 Gene

Function for LOC105379391 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379391 Gene

Localization for LOC105379391 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379391 Gene

Pathways & Interactions for LOC105379391 Gene

PathCards logo

SuperPathways for LOC105379391 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for LOC105379391 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379391 Gene

Drugs & Compounds for LOC105379391 Gene

No Compound Related Data Available

Transcripts for LOC105379391 Gene

mRNA/cDNA for LOC105379391 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379391 Gene

No ASD Table

Relevant External Links for LOC105379391 Gene

GeneLoc Exon Structure for
LOC105379391

Expression for LOC105379391 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379391 Gene

Orthologs for LOC105379391 Gene

Evolution for LOC105379391 Gene

ENSEMBL:
Gene Tree for LOC105379391 (if available)
TreeFam:
Gene Tree for LOC105379391 (if available)

No data available for Orthologs for LOC105379391 Gene

Paralogs for LOC105379391 Gene

No data available for Paralogs for LOC105379391 Gene

Variants for LOC105379391 Gene

Additional dbSNP identifiers (rs#s) for LOC105379391 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379391 Gene

Disorders for LOC105379391 Gene

No disorders were found for LOC105379391 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379391 Gene

Publications for LOC105379391 Gene

No publications were found for LOC105379391 Gene.

No data available for Mastermind for LOC105379391 Gene

Products for LOC105379391 Gene

Sources for LOC105379391 Gene