Aliases for LOC105379333 Gene

Subcategory (RNA class) for LOC105379333 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105379333 Gene

  • Uncharacterized LOC105379333 3

External Ids for LOC105379333 Gene

Previous GeneCards Identifiers for LOC105379333 Gene

  • GC08U902018
  • GC08P025671

Summaries for LOC105379333 Gene

GeneCards Summary for LOC105379333 Gene

LOC105379333 (Uncharacterized LOC105379333) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379333 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379333 Gene

Genomics for LOC105379333 Gene

GeneHancer (GH) Regulatory Elements for LOC105379333 Gene

Promoters and enhancers for LOC105379333 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J025673 Enhancer 0.7 Ensembl ENCODE 0.6 +3.6 3604 1.2 RXRA SP1 ZFX JUND NR2F2 FOS LOC105379333 RF00017-6895 ENSG00000253100
GH08J025681 Enhancer 0.3 Ensembl 0.4 +11.5 11493 0.6 CBX8 RF00017-6895 LOC105379333 ENSG00000253100
GH08J025679 Enhancer 0.2 Ensembl 0.4 +9.4 9393 1.2 RF00017-6895 LOC105379333 ENSG00000253100
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379333 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105379333 Gene

Genomic Locations for LOC105379333 Gene
chr8:25,670,608-25,685,084
(GRCh38/hg38)
Size:
14,477 bases
Orientation:
Plus strand

Genomic View for LOC105379333 Gene

Genes around LOC105379333 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105379333 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379333 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379333 Gene

Proteins for LOC105379333 Gene

Post-translational modifications for LOC105379333 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379333 Gene

Domains & Families for LOC105379333 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379333 Gene

Function for LOC105379333 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379333 Gene

Localization for LOC105379333 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379333 Gene

Pathways & Interactions for LOC105379333 Gene

PathCards logo

SuperPathways for LOC105379333 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379333 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105379333 Gene

Drugs & Compounds for LOC105379333 Gene

No Compound Related Data Available

Transcripts for LOC105379333 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379333 Gene

No ASD Table

Relevant External Links for LOC105379333 Gene

GeneLoc Exon Structure for
LOC105379333

No data available for mRNA/cDNA for LOC105379333 Gene

Expression for LOC105379333 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379333 Gene

Orthologs for LOC105379333 Gene

No data available for Orthologs and Evolution for LOC105379333 Gene

Paralogs for LOC105379333 Gene

No data available for Paralogs for LOC105379333 Gene

Variants for LOC105379333 Gene

Sequence variations from dbSNP and Humsavar for LOC105379333 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000305473 -- 25,669,959(+) C/G upstream_transcript_variant
rs1000365758 -- 25,680,601(+) T/G intron_variant
rs1000376217 -- 25,675,018(+) T/C intron_variant
rs1000499698 -- 25,684,351(+) G/A intron_variant
rs1000561745 -- 25,681,691(+) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379333 Gene

Disorders for LOC105379333 Gene

No disorders were found for LOC105379333 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379333 Gene

Publications for LOC105379333 Gene

No publications were found for LOC105379333 Gene.

No data available for External Links for LOC105379333 Gene

Products for LOC105379333 Gene

Sources for LOC105379333 Gene