Aliases for LOC105379331 Gene

Subcategory (RNA class) for LOC105379331 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105379331 Gene

  • Uncharacterized LOC105379331 3

External Ids for LOC105379331 Gene

Previous GeneCards Identifiers for LOC105379331 Gene

  • GC08U901969

Summaries for LOC105379331 Gene

GeneCards Summary for LOC105379331 Gene

LOC105379331 (Uncharacterized LOC105379331) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379331 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379331 Gene

Genomics for LOC105379331 Gene

GeneHancer (GH) Regulatory Elements for LOC105379331 Gene

Promoters and enhancers for LOC105379331 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J025358 Enhancer 0.3 dbSUPER 750.6 +1.7 1706 2 RFX1 LOC105379331 CDCA2 KCTD9 MIR6876 DOCK5 RF00017-6895
GH08J025362 Enhancer 0.3 dbSUPER 750.6 -1.6 -1605 0.9 RAD21 LOC105379331 CDCA2 KCTD9 piR-44076 DOCK5 RF00017-6895
GH08J025361 Enhancer 0.2 dbSUPER 750.6 -0.5 -486 1 LOC105379331 CDCA2 KCTD9 piR-44076 DOCK5 RF00017-6895
GH08J025360 Enhancer 0.2 dbSUPER 750.6 +0.4 383 0.6 LOC105379331 CDCA2 KCTD9 MIR6876 DOCK5 RF00017-6895
GH08J025344 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +15.4 15401 4.6 SP1 POLR2A MYC HLF MAX ELF3 CREM PPARG IKZF1 BACH1 MIR6876 DOCK5 LOC105379331 RF00017-6895
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379331 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105379331 Gene

Genomic Locations for LOC105379331 Gene
chr8:25,350,604-25,361,501
(GRCh38/hg38)
Size:
10,898 bases
Orientation:
Minus strand

Genomic View for LOC105379331 Gene

Genes around LOC105379331 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105379331 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379331 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379331 Gene

Proteins for LOC105379331 Gene

Post-translational modifications for LOC105379331 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379331 Gene

Domains & Families for LOC105379331 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379331 Gene

Function for LOC105379331 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379331 Gene

Localization for LOC105379331 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379331 Gene

Pathways & Interactions for LOC105379331 Gene

PathCards logo

SuperPathways for LOC105379331 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379331 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105379331 Gene

Drugs & Compounds for LOC105379331 Gene

No Compound Related Data Available

Transcripts for LOC105379331 Gene

mRNA/cDNA for LOC105379331 Gene

(1) Additional mRNA sequences :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379331 Gene

No ASD Table

Relevant External Links for LOC105379331 Gene

GeneLoc Exon Structure for
LOC105379331

Expression for LOC105379331 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379331 Gene

Orthologs for LOC105379331 Gene

No data available for Orthologs and Evolution for LOC105379331 Gene

Paralogs for LOC105379331 Gene

No data available for Paralogs for LOC105379331 Gene

Variants for LOC105379331 Gene

Sequence variations from dbSNP and Humsavar for LOC105379331 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000177532 -- 25,358,269(-) C/G intron_variant
rs1000386637 -- 25,352,665(-) G/A/T intron_variant
rs1000480031 -- 25,352,376(-) A/G intron_variant
rs1000490445 -- 25,357,084(-) G/T intron_variant
rs1000611389 -- 25,358,480(-) T/C intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379331 Gene

Disorders for LOC105379331 Gene

No disorders were found for LOC105379331 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379331 Gene

Publications for LOC105379331 Gene

No publications were found for LOC105379331 Gene.

No data available for External Links for LOC105379331 Gene

Products for LOC105379331 Gene

Sources for LOC105379331 Gene