Aliases for LOC105379327 Gene

Subcategory (RNA class) for LOC105379327 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105379327 Gene

  • Uncharacterized LOC105379327 3
  • CTC-756D1.3 3

External Ids for LOC105379327 Gene

Previous GeneCards Identifiers for LOC105379327 Gene

  • GC08U902117

Summaries for LOC105379327 Gene

GeneCards Summary for LOC105379327 Gene

LOC105379327 (Uncharacterized LOC105379327) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379327 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379327 Gene

Genomics for LOC105379327 Gene

GeneHancer (GH) Regulatory Elements for LOC105379327 Gene

Promoters and enhancers for LOC105379327 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J023489 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 750.6 -0.7 -710 10.4 ZBTB40 SMARCE1 RUNX1 MYC CC2D1A NFYC ELF1 L3MBTL2 RBM39 MAX ENSG00000253986 LOC105379327 ENSG00000253200 LOXL2 C8orf58 CCAR2 ENTPD4 SORBS3 SLC25A37 BIN3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379327 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105379327 Gene

Genomic Locations for LOC105379327 Gene
chr8:23,492,298-23,493,891
(GRCh38/hg38)
Size:
1,594 bases
Orientation:
Minus strand

Genomic View for LOC105379327 Gene

Genes around LOC105379327 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105379327 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379327 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379327 Gene

Proteins for LOC105379327 Gene

Post-translational modifications for LOC105379327 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379327 Gene

Domains & Families for LOC105379327 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379327 Gene

Function for LOC105379327 Gene

Phenotypes From GWAS Catalog for LOC105379327 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379327 Gene

Localization for LOC105379327 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379327 Gene

Pathways & Interactions for LOC105379327 Gene

PathCards logo

SuperPathways for LOC105379327 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379327 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105379327 Gene

Drugs & Compounds for LOC105379327 Gene

No Compound Related Data Available

Transcripts for LOC105379327 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379327 Gene

No ASD Table

Relevant External Links for LOC105379327 Gene

GeneLoc Exon Structure for
LOC105379327

No data available for mRNA/cDNA for LOC105379327 Gene

Expression for LOC105379327 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379327 Gene

Orthologs for LOC105379327 Gene

No data available for Orthologs and Evolution for LOC105379327 Gene

Paralogs for LOC105379327 Gene

No data available for Paralogs for LOC105379327 Gene

Variants for LOC105379327 Gene

Sequence variations from dbSNP and Humsavar for LOC105379327 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000393841 -- 23,494,660(-) C/G/T non_coding_transcript_variant
rs1000452370 -- 23,493,865(-) G/A non_coding_transcript_variant
rs1000896314 -- 23,492,218(-) T/C non_coding_transcript_variant
rs1001161205 -- 23,495,085(-) A/G upstream_transcript_variant
rs1002177215 -- 23,493,176(-) C/T non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379327 Gene

Disorders for LOC105379327 Gene

No disorders were found for LOC105379327 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379327 Gene

Publications for LOC105379327 Gene

No publications were found for LOC105379327 Gene.

No data available for External Links for LOC105379327 Gene

Products for LOC105379327 Gene

Sources for LOC105379327 Gene