Aliases for LOC105379318 Gene

Subcategory (RNA class) for LOC105379318 Gene

ncRNA

Aliases for LOC105379318 Gene

  • Uncharacterized LOC105379318 3

External Ids for LOC105379318 Gene

Previous GeneCards Identifiers for LOC105379318 Gene

  • GC08U902033

Summaries for LOC105379318 Gene

GeneCards Summary for LOC105379318 Gene

LOC105379318 (Uncharacterized LOC105379318) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379318 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379318 Gene

Genomics for LOC105379318 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105379318 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J021857 Enhancer 1 Ensembl ENCODE 600.7 +0.4 423 10.2 ZNF512 RFX1 DPF2 HDAC1 SOX6 TCF12 EP300 CBX3 ZNF766 HMBOX1 LOC105379318 lnc-GFRA2-3 GFRA2 piR-61101-628 DOK2
GH08J021886 Enhancer 0.7 Ensembl 0.3 -25.1 -25076 1.2 LEF1 IKZF1 MTA2 MTA1 ZNF24 HDAC1 SOX6 TCF12 EP300 TARDBP LOC107986923 GFRA2 LOC105379318 DOK2
GH08J021882 Enhancer 0.5 Ensembl 0.4 -21.3 -21277 0.8 ZNF629 ATF2 EBF1 ZNF24 EGR2 LOC107986923 LOC105379318 DOK2 GFRA2
GH08J021854 Enhancer 0.3 Ensembl 0.4 +7.0 7023 0.6 SPI1 GFRA2 LOC105379318 lnc-GFRA2-3 piR-61101-628 DOK2
GH08J021881 Enhancer 0.3 Ensembl 0.4 -20.0 -19977 0.2 BHLHE40 LOC107986923 LOC105379318 DOK2 GFRA2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379318 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105379318 Gene

Genomic Locations for LOC105379318 Gene
chr8:21,850,059-21,861,324
(GRCh38/hg38)
Size:
11,266 bases
Orientation:
Minus strand

Genomic View for LOC105379318 Gene

Genes around LOC105379318 on UCSC Golden Path with GeneCards custom track
LOC105379318 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105379318 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379318 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379318 Gene

Proteins for LOC105379318 Gene

Post-translational modifications for LOC105379318 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379318 Gene

Domains & Families for LOC105379318 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379318 Gene

Function for LOC105379318 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379318 Gene

Localization for LOC105379318 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379318 Gene

Pathways & Interactions for LOC105379318 Gene

PathCards logo

SuperPathways for LOC105379318 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379318 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379318 Gene

Drugs & Compounds for LOC105379318 Gene

No Compound Related Data Available

Transcripts for LOC105379318 Gene

LOC105379318 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379318 Gene

No ASD Table

Relevant External Links for LOC105379318 Gene

GeneLoc Exon Structure for
LOC105379318

No data available for mRNA/cDNA for LOC105379318 Gene

Expression for LOC105379318 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379318 Gene

Orthologs for LOC105379318 Gene

No data available for Orthologs and Evolution for LOC105379318 Gene

Paralogs for LOC105379318 Gene

No data available for Paralogs for LOC105379318 Gene

Variants for LOC105379318 Gene

Additional dbSNP identifiers (rs#s) for LOC105379318 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379318 Gene

Disorders for LOC105379318 Gene

No disorders were found for LOC105379318 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379318 Gene

Publications for LOC105379318 Gene

No publications were found for LOC105379318 Gene.

No data available for Mastermind for LOC105379318 Gene

Products for LOC105379318 Gene

Sources for LOC105379318 Gene