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Aliases for LOC105379314 Gene

Subcategory (RNA class) for LOC105379314 Gene

ncRNA

Quality Score for this RNA gene is

13

Aliases for LOC105379314 Gene

  • Uncharacterized LOC105379314 3

External Ids for LOC105379314 Gene

Previous GeneCards Identifiers for LOC105379314 Gene

  • GC08U901973

Summaries for LOC105379314 Gene

GeneCards Summary for LOC105379314 Gene

LOC105379314 (Uncharacterized LOC105379314) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379314 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105379314 Gene

Genomics for LOC105379314 Gene

GeneHancer (GH) Regulatory Elements for LOC105379314 Gene

Promoters and enhancers for LOC105379314 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J020344 Enhancer 0.2 Ensembl 600.7 +1.2 1217 0.8 LOC105379314 ENSG00000253164 RNU6-892P LZTS1
GH08J020305 Promoter/Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -36.7 -36653 2.7 SP7 ZNF600 ZIC2 FOS RNU6-892P LZTS1 LOC105379314
GH08J020353 Enhancer 0.7 Ensembl ENCODE 0.4 +9.5 9517 1.8 SP1 NANOG POLR2A POU5F1 ENSG00000253164 LZTS1 RNU6-892P LOC105379314 GC08P020510
GH08J020310 Enhancer 0.9 ENCODE 0.3 -32.4 -32384 1.6 ZSCAN21 SP7 MZF1 ZNF680 ZNF488 ZBTB8A PRDM10 ZNF512 ZIC2 ZSCAN4 INTS10 RNU6-892P LZTS1 LOC105379314
GH08J020348 Enhancer 0.6 Ensembl ENCODE 0.4 +6.4 6371 1.9 POLR2A ZNF335 ENSG00000253164 LZTS1 RNU6-892P LOC105379314
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379314 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105379314 Gene

Genomic Locations for LOC105379314 Gene
chr8:20,343,384-20,370,627
(GRCh38/hg38)
Size:
27,244 bases
Orientation:
Plus strand

Genomic View for LOC105379314 Gene

Genes around LOC105379314 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105379314 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379314 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379314 Gene

Proteins for LOC105379314 Gene

Post-translational modifications for LOC105379314 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379314 Gene

Domains & Families for LOC105379314 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105379314 Gene

Function for LOC105379314 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379314 Gene

Localization for LOC105379314 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379314 Gene

Pathways & Interactions for LOC105379314 Gene

PathCards logo

SuperPathways for LOC105379314 Gene

No Data Available

Interacting Proteins for LOC105379314 Gene

Gene Ontology (GO) - Biological Process for LOC105379314 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105379314 Gene

Drugs & Compounds for LOC105379314 Gene

No Compound Related Data Available

Transcripts for LOC105379314 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379314 Gene

No ASD Table

Relevant External Links for LOC105379314 Gene

GeneLoc Exon Structure for
LOC105379314

No data available for mRNA/cDNA for LOC105379314 Gene

Expression for LOC105379314 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379314 Gene

Orthologs for LOC105379314 Gene

No data available for Orthologs and Evolution for LOC105379314 Gene

Paralogs for LOC105379314 Gene

No data available for Paralogs for LOC105379314 Gene

Variants for LOC105379314 Gene

Sequence variations from dbSNP and Humsavar for LOC105379314 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1000073528 -- 20,345,168(+) C/A intron_variant
rs1000146191 -- 20,370,321(+) C/T intron_variant
rs1000146422 -- 20,352,691(+) G/T intron_variant
rs1000159322 -- 20,349,243(+) C/T intron_variant
rs1000195924 -- 20,362,600(+) G/A intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379314 Gene

Disorders for LOC105379314 Gene

No disorders were found for LOC105379314 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379314 Gene

Publications for LOC105379314 Gene

No publications were found for LOC105379314 Gene.

No data available for External Links for LOC105379314 Gene

Products for LOC105379314 Gene

Sources for LOC105379314 Gene

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