LOC105379314 Gene (RNA Gene)

Uncharacterized LOC105379314

GC08P020343
GIFtS:
1
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Aliases for LOC105379314 Gene

Data sources for LOC105379314 Gene:

Subcategory (RNA class) for LOC105379314 Gene

ncRNA

Aliases for LOC105379314 Gene

External Ids for LOC105379314 Gene

Previous GeneCards Identifiers for LOC105379314 Gene

  • GC08U901973

Summaries for LOC105379314 Gene

GeneCards Summary for LOC105379314 Gene

LOC105379314 (Uncharacterized LOC105379314) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379314 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379314 Gene

Genomics for LOC105379314 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105379314 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH08J020344 Enhancer 0.3 Ensembl 250.7 +1.3 1317 1 SPI1 LOC105379314 ENSG00000253164 RNU6-892P LZTS1 HSALNG0063800-001
GH08J020377 Enhancer 0.9 Ensembl ENCODE 0.3 +33.5 33488 6.1 CTCF ZIC2 REST TRIM22 ZNF341 SMC3 RAD21 YY1 SMARCA5 ZNF2 ENSG00000253164 INTS10 RNU6-892P LZTS1 HSALNG0063800-001 LOC105379314
GH08J020348 Enhancer 0.6 Ensembl ENCODE CraniofacialAtlas 0.4 +6.0 6017 2.8 ZNF335 ENSG00000253164 LZTS1 RNU6-892P LOC105379314 HSALNG0063800-001
GH08J020353 Enhancer 0.6 Ensembl ENCODE 0.4 +10.0 10017 0.6 SP1 POU5F1 NANOG POLR2A KDM1A LZTS1 RNU6-892P LOC105379314 HSALNG0063800-001 ENSG00000253164
GH08J020360 Enhancer 0.7 Ensembl ENCODE 0.4 +18.2 18184 1.4 ZIC2 CEBPG ATF4 RCOR1 GATA2 CHD2 CEBPB LOC105379314 HSALNG0063800-001 ENSG00000253164 LZTS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379314 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105379314 Gene

Latest Assembly
chr8:20,343,384-20,372,718
(GRCh38/hg38)
Size:
29,335 bases
Orientation:
Plus strand

Genomic View for LOC105379314 Gene

Genes around LOC105379314 on UCSC Golden Path with GeneCards custom track
LOC105379314 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
LOC105379314 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379314 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105379314 Gene

Proteins for LOC105379314 Gene

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  3. Assay products for research

Post-translational modifications for LOC105379314 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379314 Gene

Domains & Families for LOC105379314 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379314 Gene

Function for LOC105379314 Gene

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  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379314 Gene

Localization for LOC105379314 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379314 Gene

Pathways & Interactions for LOC105379314 Gene

PathCards logo

SuperPathways for LOC105379314 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379314 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379314 Gene

Drugs & Compounds for LOC105379314 Gene

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  1. Drug products for research
No Compound Related Data Available

Transcripts for LOC105379314 Gene

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  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research
LOC105379314 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379314 Gene

No ASD Table

Relevant External Links for LOC105379314 Gene

GeneLoc Exon Structure for
LOC105379314

No data available for mRNA/cDNA for LOC105379314 Gene

Expression for LOC105379314 Gene

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No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379314 Gene

Orthologs for LOC105379314 Gene

No data available for Orthologs and Evolution for LOC105379314 Gene

Paralogs for LOC105379314 Gene

No data available for Paralogs for LOC105379314 Gene

Variants for LOC105379314 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for LOC105379314 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379314 Gene

Disorders for LOC105379314 Gene

No disorders were found for LOC105379314 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379314 Gene

Publications for LOC105379314 Gene

No publications were found for LOC105379314 Gene.

No data available for Mastermind for LOC105379314 Gene

Products for LOC105379314 Gene

Sources for LOC105379314 Gene