Aliases for LOC105379311 Gene

Subcategory (RNA class) for LOC105379311 Gene

ncRNA

Aliases for LOC105379311 Gene

  • Uncharacterized LOC105379311 3

External Ids for LOC105379311 Gene

Previous GeneCards Identifiers for LOC105379311 Gene

  • GC08U902157

Summaries for LOC105379311 Gene

GeneCards Summary for LOC105379311 Gene

LOC105379311 (Uncharacterized LOC105379311) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379311 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379311 Gene

Genomics for LOC105379311 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105379311 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J020085 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 +8.1 8136 2 CTCF GABPA CEBPA CEBPB CHD2 NR2C2 NR2F2 EP300 NR2F1 STAT3 ATP6V1B2 CSGALNACT1 ENSG00000253775 LOC105379311 lnc-ATP6V1B2-2 LOC105379310 SLC18A1 LPL
GH08J020119 Enhancer 1 FANTOM5 Ensembl ENCODE 0.3 +44.5 44487 8 CTCF REST RAD21 ZNF24 SP1 FOS SMC3 JUND FOSL1 FOSL2 L13714-426 ENSG00000253775 INTS10 CSGALNACT1 ATP6V1B2 MG828742 LOC105379312 LOC105379311 SLC18A1 LPL
GH08J020074 Enhancer 0.3 ENCODE 0.7 -4.2 -4244 0.8 NR2F2 HLF LPL LOC105379311 piR-47162-166 SLC18A1
GH08J020061 Enhancer 0.6 Ensembl ENCODE 0.4 -16.0 -16013 2.2 CEBPB NR2F2 EP300 PSD3 piR-47162-166 LOC105379311 SLC18A1 LPL
GH08J020105 Enhancer 0.6 ENCODE 0.3 +27.2 27171 1.1 CEBPB EGR1 CHD2 FOS MAX MAZ EP300 ZFHX2 CEBPG MAFK ENSG00000253775 INTS10 LOC105379310 LOC105379311 lnc-ATP6V1B2-2 SLC18A1 LPL
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379311 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105379311 Gene

Genomic Locations for LOC105379311 Gene
chr8:20,078,714-20,121,033
(GRCh38/hg38)
Size:
42,320 bases
Orientation:
Plus strand

Genomic View for LOC105379311 Gene

Genes around LOC105379311 on UCSC Golden Path with GeneCards custom track
LOC105379311 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105379311 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379311 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379311 Gene

Proteins for LOC105379311 Gene

Post-translational modifications for LOC105379311 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379311 Gene

Domains & Families for LOC105379311 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379311 Gene

Function for LOC105379311 Gene

Phenotypes From GWAS Catalog for LOC105379311 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379311 Gene

Localization for LOC105379311 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379311 Gene

Pathways & Interactions for LOC105379311 Gene

PathCards logo

SuperPathways for LOC105379311 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379311 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379311 Gene

Drugs & Compounds for LOC105379311 Gene

No Compound Related Data Available

Transcripts for LOC105379311 Gene

LOC105379311 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379311 Gene

No ASD Table

Relevant External Links for LOC105379311 Gene

GeneLoc Exon Structure for
LOC105379311

No data available for mRNA/cDNA for LOC105379311 Gene

Expression for LOC105379311 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379311 Gene

Orthologs for LOC105379311 Gene

No data available for Orthologs and Evolution for LOC105379311 Gene

Paralogs for LOC105379311 Gene

No data available for Paralogs for LOC105379311 Gene

Variants for LOC105379311 Gene

Additional dbSNP identifiers (rs#s) for LOC105379311 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379311 Gene

Disorders for LOC105379311 Gene

No disorders were found for LOC105379311 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379311 Gene

Publications for LOC105379311 Gene

No publications were found for LOC105379311 Gene.

No data available for Mastermind for LOC105379311 Gene

Products for LOC105379311 Gene

Sources for LOC105379311 Gene