Aliases for LOC105379306 Gene

Subcategory (RNA class) for LOC105379306 Gene

ncRNA

Aliases for LOC105379306 Gene

  • Uncharacterized LOC105379306 3

External Ids for LOC105379306 Gene

Previous GeneCards Identifiers for LOC105379306 Gene

  • GC08U901991

Summaries for LOC105379306 Gene

GeneCards Summary for LOC105379306 Gene

LOC105379306 (Uncharacterized LOC105379306) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379306 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379306 Gene

Genomics for LOC105379306 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105379306 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J019298 Enhancer 0.9 FANTOM5 Ensembl ENCODE 600.7 -1.6 -1561 1.7 CEBPB FOS ZFHX2 BHLHE40 MAFK JUND EGR2 NFE2L2 CHD1 POLR2A LOC105379306 SH2D4A ENSG00000279919 RF00017-6867 PSD3
GH08J019311 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +13.8 13839 4.9 HNRNPL GATAD2A TEAD4 TFE3 CTCF ZNF692 ZNF174 PRDM1 ZIC2 RBFOX2 SH2D4A CSGALNACT1 LOC105379306 piR-55053 RF00017-6867
GH08J019290 Enhancer 0.9 Ensembl ENCODE 0.4 -9.1 -9085 2.5 CEBPG CREB1 SP1 CEBPB RFX1 JUND BRCA1 CTBP1 ATF3 NR3C1 SH2D4A INTS10 LOC105379306 ENSG00000279919 RF00017-6867 PSD3
GH08J019279 Enhancer 0.6 ENCODE 0.4 -20.2 -20160 1.1 GATAD2A SP1 CEBPA SOX13 FOXA2 TEAD1 TFAP4 HNF4A NFIL3 RXRA SH2D4A RPL35P6 ENSG00000279919 LOC105379306 RF00017-6867 PSD3
GH08J019278 Enhancer 0.6 ENCODE 0.4 -21.9 -21858 0.2 REST SP1 FOXA2 ATF3 YY1 GABPA ZBTB33 TFDP1 JUND NR2F2 ENSG00000279919 SH2D4A LOC105379306 RF00017-6867 PSD3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379306 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105379306 Gene

Genomic Locations for LOC105379306 Gene
chr8:19,300,523-19,312,032
(GRCh38/hg38)
Size:
11,510 bases
Orientation:
Plus strand

Genomic View for LOC105379306 Gene

Genes around LOC105379306 on UCSC Golden Path with GeneCards custom track
LOC105379306 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105379306 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379306 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379306 Gene

Proteins for LOC105379306 Gene

Post-translational modifications for LOC105379306 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379306 Gene

Domains & Families for LOC105379306 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379306 Gene

Function for LOC105379306 Gene

Phenotypes From GWAS Catalog for LOC105379306 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379306 Gene

Localization for LOC105379306 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379306 Gene

Pathways & Interactions for LOC105379306 Gene

PathCards logo

SuperPathways for LOC105379306 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379306 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379306 Gene

Drugs & Compounds for LOC105379306 Gene

No Compound Related Data Available

Transcripts for LOC105379306 Gene

LOC105379306 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379306 Gene

No ASD Table

Relevant External Links for LOC105379306 Gene

GeneLoc Exon Structure for
LOC105379306

No data available for mRNA/cDNA for LOC105379306 Gene

Expression for LOC105379306 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379306 Gene

Orthologs for LOC105379306 Gene

No data available for Orthologs and Evolution for LOC105379306 Gene

Paralogs for LOC105379306 Gene

No data available for Paralogs for LOC105379306 Gene

Variants for LOC105379306 Gene

Additional dbSNP identifiers (rs#s) for LOC105379306 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379306 Gene

Disorders for LOC105379306 Gene

No disorders were found for LOC105379306 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379306 Gene

Publications for LOC105379306 Gene

No publications were found for LOC105379306 Gene.

No data available for Mastermind for LOC105379306 Gene

Products for LOC105379306 Gene

Sources for LOC105379306 Gene