LOC105379301 Gene (RNA Gene)

Uncharacterized LOC105379301

GC08P019092
GIFtS:
2
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Aliases for LOC105379301 Gene

Subcategory (RNA class) for LOC105379301 Gene

ncRNA

Aliases for LOC105379301 Gene

  • Uncharacterized LOC105379301 3

External Ids for LOC105379301 Gene

Previous GeneCards Identifiers for LOC105379301 Gene

  • GC08U902468

Summaries for LOC105379301 Gene

GeneCards Summary for LOC105379301 Gene

LOC105379301 (Uncharacterized LOC105379301) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379301 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379301 Gene

Genomics for LOC105379301 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for LOC105379301 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH08J019090 Enhancer 0.3 Ensembl 600.7 -1.7 -1656 0.2 CEBPB CEBPG ENSG00000254242 LOC105379301 PSD3 ENSG00000253557 SH2D4A
GH08J019093 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.7 +4.0 3958 4.6 PRDM10 ZNF629 SP1 ZNF600 TSHZ1 CEBPB ZSCAN5C OSR2 FOS WT1 ENSG00000271654 ENSG00000254242 LOC105379301 PSD3 piR-33804-104 ENSG00000253557 SH2D4A
GH08J019086 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.7 -4.0 -4043 1.5 ZNF512 ZNF398 PSD3 LOC105379301 ENSG00000253557 SH2D4A
GH08J019132 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +43.4 43444 5.6 ZNF629 ZNF692 ZSCAN4 ZNF600 JUND CEBPB FOS CHD2 JUN MAX RF00017-6866 lnc-SH2D4A-5 piR-33804-104 SH2D4A LOC105379301 ENSG00000254242 PSD3 ENSG00000253557
GH08J019126 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.3 +36.8 36777 3.3 ZNF629 ZNF692 SP1 CEBPB JUND RUNX3 BRCA1 NR3C1 JUN FOS piR-33804-104 ENSG00000254242 LOC105379301 PSD3 ENSG00000253557 SH2D4A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379301 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105379301 Gene

Genomic Locations for LOC105379301 Gene
chr8:19,091,557-19,145,393
(GRCh38/hg38)
Size:
53,837 bases
Orientation:
Plus strand

Genomic View for LOC105379301 Gene

Genes around LOC105379301 on UCSC Golden Path with GeneCards custom track
LOC105379301 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105379301 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379301 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for LOC105379301 Gene

Proteins for LOC105379301 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for LOC105379301 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379301 Gene

Domains & Families for LOC105379301 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379301 Gene

Function for LOC105379301 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379301 Gene

Localization for LOC105379301 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379301 Gene

Pathways & Interactions for LOC105379301 Gene

PathCards logo

SuperPathways for LOC105379301 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379301 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379301 Gene

Drugs & Compounds for LOC105379301 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for LOC105379301 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
LOC105379301 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379301 Gene

No ASD Table

Relevant External Links for LOC105379301 Gene

GeneLoc Exon Structure for
LOC105379301

No data available for mRNA/cDNA for LOC105379301 Gene

Expression for LOC105379301 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379301 Gene

Orthologs for LOC105379301 Gene

No data available for Orthologs and Evolution for LOC105379301 Gene

Paralogs for LOC105379301 Gene

No data available for Paralogs for LOC105379301 Gene

Variants for LOC105379301 Gene

Additional dbSNP identifiers (rs#s) for LOC105379301 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379301 Gene

Disorders for LOC105379301 Gene

No disorders were found for LOC105379301 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379301 Gene

Publications for LOC105379301 Gene

No publications were found for LOC105379301 Gene.

No data available for Mastermind for LOC105379301 Gene

Products for LOC105379301 Gene

Sources for LOC105379301 Gene