Aliases for LOC105379297 Gene

Subcategory (RNA class) for LOC105379297 Gene

ncRNA

Aliases for LOC105379297 Gene

  • Uncharacterized LOC105379297 3

External Ids for LOC105379297 Gene

Previous GeneCards Identifiers for LOC105379297 Gene

  • GC08U902325

Summaries for LOC105379297 Gene

GeneCards Summary for LOC105379297 Gene

LOC105379297 (Uncharacterized LOC105379297) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105379297 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for LOC105379297 Gene

Genomics for LOC105379297 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for LOC105379297 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J016825 Enhancer 1 ENCODE 0.2 +89.6 89629 2.2 ZNF221 ATF7 PRDM10 ZNF629 ZNF692 ZNF300 PRDM1 ZIC2 ZNF776 ZSCAN4 MICU3 ENSG00000249258 ZDHHC2 MTUS1 CNOT7 FJ601678-105 piR-36846-006 LOC105379297 ENSG00000253496 FGF20
GH08J016831 Enhancer 0.7 ENCODE 0.2 +83.8 83781 1 CTCF TEAD4 RAD21 SP1 CEBPA SCRT2 CEBPB TCF7 CHD2 RCOR1 FJ601678-105 CNOT7 ZDHHC2 piR-36846-006 LOC105379297 ENSG00000253496 FGF20 MSR1
GH08J016837 Enhancer 0.6 Ensembl ENCODE 0.2 +77.7 77723 2 CTCF FOS RAD21 JUND MAFK FGF20 ZDHHC2 FJ601678-105 RN7SL474P lnc-FGF20-3 RF00017-6857 LOC105379297 ENSG00000253496 MSR1
GH08J016896 Enhancer 0.2 FANTOM5 0.4 +19.4 19375 0.3 LOC105379297 piR-57176-607 ENSG00000253496 FGF20 MSR1
GH08J016833 Enhancer 0.3 Ensembl 0.2 +82.3 82327 0.2 FOSL2 ZNF133 FJ601678-105 ZDHHC2 RN7SL474P lnc-FGF20-3 RF00017-6857 LOC105379297 ENSG00000253496 FGF20 MSR1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around LOC105379297 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for LOC105379297 Gene

Genomic Locations for LOC105379297 Gene
chr8:16,783,215-16,916,028
(GRCh38/hg38)
Size:
132,814 bases
Orientation:
Minus strand

Genomic View for LOC105379297 Gene

Genes around LOC105379297 on UCSC Golden Path with GeneCards custom track
LOC105379297 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
LOC105379297 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105379297 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105379297 Gene

Proteins for LOC105379297 Gene

Post-translational modifications for LOC105379297 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105379297 Gene

Domains & Families for LOC105379297 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for LOC105379297 Gene

Function for LOC105379297 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105379297 Gene

Localization for LOC105379297 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105379297 Gene

Pathways & Interactions for LOC105379297 Gene

PathCards logo

SuperPathways for LOC105379297 Gene

No Data Available

Gene Ontology (GO) - Biological Process for LOC105379297 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for LOC105379297 Gene

Drugs & Compounds for LOC105379297 Gene

No Compound Related Data Available

Transcripts for LOC105379297 Gene

LOC105379297 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105379297 Gene

No ASD Table

Relevant External Links for LOC105379297 Gene

GeneLoc Exon Structure for
LOC105379297

No data available for mRNA/cDNA for LOC105379297 Gene

Expression for LOC105379297 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105379297 Gene

Orthologs for LOC105379297 Gene

No data available for Orthologs and Evolution for LOC105379297 Gene

Paralogs for LOC105379297 Gene

No data available for Paralogs for LOC105379297 Gene

Variants for LOC105379297 Gene

Additional dbSNP identifiers (rs#s) for LOC105379297 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105379297 Gene

Disorders for LOC105379297 Gene

No disorders were found for LOC105379297 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105379297 Gene

Publications for LOC105379297 Gene

No publications were found for LOC105379297 Gene.

No data available for Mastermind for LOC105379297 Gene

Products for LOC105379297 Gene

Sources for LOC105379297 Gene